Autoregulation of TDP-43 mRNA levels involves interplay between transcription, splicing, and alternative polyA site selection

被引:139
作者
Avendano-Vazquez, S. Erendira [2 ]
Dhir, Ashish [1 ]
Bembich, Sara [2 ]
Buratti, Emanuele [2 ]
Proudfoot, Nicholas [1 ]
Baralle, Francisco E. [2 ]
机构
[1] Univ Oxford, Sir William Dunn Sch Pathol, Oxford OX1 3RE, England
[2] Int Ctr Genet Engn & Biotechnol, I-34149 Trieste, Italy
基金
英国惠康基金;
关键词
ALS; FTD; TDP-43; autoregulation; mRNA splicing; polyadenylation; FRONTOTEMPORAL LOBAR DEGENERATION; AMYOTROPHIC-LATERAL-SCLEROSIS; GENE-EXPRESSION; TRANSGENIC MICE; POLYMERASE-II; POLYADENYLATION; DECAY; PHOSPHORYLATION; PROTEINOPATHY; ACCUMULATION;
D O I
10.1101/gad.194829.112
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
TDP-43 is a critical RNA-binding factor associated with pre-mRNA splicing in mammals. Its expression is tightly autoregulated, with loss of this regulation implicated in human neuropathology. We demonstrate that TDP-43 overexpression in humans and mice activates a 39 untranslated region (UTR) intron, resulting in excision of the proximal polyA site ( PAS) pA(1). This activates a cryptic PAS that prevents TDP-43 expression through a nuclear retention mechanism. Superimposed on this process, overexpression of TDP-43 blocks recognition of pA(1) by competing with CstF-64 for PAS binding. Overall, we uncover complex interplay between transcription, splicing, and 39 end processing to effect autoregulation of TDP-43.
引用
收藏
页码:1679 / 1684
页数:6
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