It's the genes! EST access to human genome content

被引:56
作者
Gerhold, D
Caskey, CT
机构
[1] Human Genetics Department, Merck and Co., West Point
关键词
D O I
10.1002/bies.950181207
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
ESTs or 'expressed sequence tags' are DNA sequences read from both ends of expressed gene fragments. The Merck-WashU EST Project and several other public EST projects are being performed to rapidly discover the complement of human genes, and make them easily accessible. These ESTs are widely used to discover novel members of gene families, to map genes to chromosomes as 'sequence-tagged sites' (STSs), and to identify mutations leading to heritable diseases. Informatic strategies for querying the EST databases are discussed, as well as the strengths and weaknesses of the EST data. There is a compelling need to build on the informatic synthesis of human gene data, and to devise facile methods for determining gene functions.
引用
收藏
页码:973 / 981
页数:9
相关论文
共 46 条
  • [1] Toward the development of a gene index to the human genome: An assessment of the nature of high-throughput EST sequence data
    Aaronson, JS
    Eckman, B
    Blevins, RA
    Borkowski, JA
    Myerson, J
    Imran, S
    Elliston, KO
    [J]. GENOME RESEARCH, 1996, 6 (09): : 829 - 845
  • [2] SEQUENCE IDENTIFICATION OF 2,375 HUMAN BRAIN GENES
    ADAMS, MD
    DUBNICK, M
    KERLAVAGE, AR
    MORENO, R
    KELLEY, JM
    UTTERBACK, TR
    NAGLE, JW
    FIELDS, C
    VENTER, JC
    [J]. NATURE, 1992, 355 (6361) : 632 - 634
  • [3] MOLECULAR-GENETICS OF DIABETES-MELLITUS
    AITMAN, TJ
    TODD, JA
    [J]. BAILLIERES CLINICAL ENDOCRINOLOGY AND METABOLISM, 1995, 9 (03): : 631 - 656
  • [4] ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
  • [5] Identification and mapping of human cDNAs homologous to Drosophila mutant genes through EST database searching
    Banfi, S
    Borsani, G
    Rossi, E
    Bernard, L
    Guffanti, A
    Rubboli, F
    Marchitiello, A
    Giglio, S
    Coluccia, E
    Zollo, M
    Zuffardi, O
    Ballabio, A
    [J]. NATURE GENETICS, 1996, 13 (02) : 167 - 174
  • [6] GENBANK
    BENSON, DA
    BOGUSKI, M
    LIPMAN, DJ
    OSTELL, J
    [J]. NUCLEIC ACIDS RESEARCH, 1994, 22 (17) : 3441 - 3444
  • [7] ESTABLISHING A HUMAN TRANSCRIPT MAP
    BOGUSKI, MS
    SCHULER, GD
    [J]. NATURE GENETICS, 1995, 10 (04) : 369 - 371
  • [8] DBEST - DATABASE FOR EXPRESSED SEQUENCE TAGS
    BOGUSKI, MS
    LOWE, TMJ
    TOLSTOSHEV, CM
    [J]. NATURE GENETICS, 1993, 4 (04) : 332 - 333
  • [9] BONALDO MD, 1994, HUM MOL GENET, V3, P1663
  • [10] A defect in nurturing in mice lacking the immediate early gene fosB
    Brown, JR
    Ye, H
    Bronson, RT
    Dikkes, P
    Greenberg, ME
    [J]. CELL, 1996, 86 (02) : 297 - 309