Cutting-edge technology - I. Global gene expression profiling using DNA microarrays

被引:25
作者
Arcellana-Panlilio, M
Robbins, SM
机构
[1] Univ Calgary, Fac Med, Dept Oncol, So Alberta Microarray Facil, Calgary, AB T2N 4N1, Canada
[2] Univ Calgary, Fac Med, So Alberta Microarray Facil, Dept Biochem & Mol Biol, Calgary, AB T2N 4N1, Canada
来源
AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY | 2002年 / 282卷 / 03期
关键词
genome; human; gene expression profiling; oligonucleotide array sequence analysis; genetic techniques;
D O I
10.1152/ajpgi.00519.2001
中图分类号
R57 [消化系及腹部疾病];
学科分类号
摘要
Having the complete human genomic sequence poses a new challenge: to use genomic structural information to display and analyze biological processes on a genome-wide scale to assign gene function. DNA microarrays are a miniaturized, ordered arrangement of nucleic acid fragments from individual genes located at defined positions on a solid support, enabling the analysis of thousands of genes in parallel by specific hybridization. This review describes technical aspects, discusses relevant applications, and suggests factors affecting the use of this technology and how it fits in the grand scheme of meeting the needs of the postgenomic era.
引用
收藏
页码:G397 / G402
页数:6
相关论文
共 27 条
  • [1] Toll-like receptors in the induction of the innate immune response
    Aderem, A
    Ulevitch, RJ
    [J]. NATURE, 2000, 406 (6797) : 782 - 787
  • [2] Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling
    Alizadeh, AA
    Eisen, MB
    Davis, RE
    Ma, C
    Lossos, IS
    Rosenwald, A
    Boldrick, JG
    Sabet, H
    Tran, T
    Yu, X
    Powell, JI
    Yang, LM
    Marti, GE
    Moore, T
    Hudson, J
    Lu, LS
    Lewis, DB
    Tibshirani, R
    Sherlock, G
    Chan, WC
    Greiner, TC
    Weisenburger, DD
    Armitage, JO
    Warnke, R
    Levy, R
    Wilson, W
    Grever, MR
    Byrd, JC
    Botstein, D
    Brown, PO
    Staudt, LM
    [J]. NATURE, 2000, 403 (6769) : 503 - 511
  • [3] Quantitative analysis of mRNA amplification by in vitro transcription
    Baugh, L. R.
    Hill, A. A.
    Brown, E. L.
    Hunter, Craig P.
    [J]. NUCLEIC ACIDS RESEARCH, 2001, 29 (05)
  • [4] Modulation of intestinal gene expression by dietary zinc status: Effectiveness of cDNA arrays for expression profiling of a single nutrient deficiency
    Blanchard, RK
    Moore, JB
    Green, CL
    Cousins, RJ
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (24) : 13507 - 13513
  • [5] Gene expression in individual cells: analysis using global single cell reverse transcription polymerase chain reaction (GSC RT-PCR)
    Brail, LH
    Jang, A
    Billia, F
    Iscove, NN
    Klamut, HJ
    Hill, RP
    [J]. MUTATION RESEARCH-GENOMICS, 1999, 406 (2-4): : 45 - 54
  • [6] Genomic profiling of short- and long-term caloric restriction effects in the liver of aging mice
    Cao, SX
    Dhahbi, JM
    Mote, PL
    Spindler, SR
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (19) : 10630 - 10635
  • [7] Genomic analysis of metastasis reveals an essential role for RhoC
    Clark, EA
    Golub, TR
    Lander, ES
    Hynes, RO
    [J]. NATURE, 2000, 406 (6795) : 532 - 535
  • [8] DeRisi J, 1996, NAT GENET, V14, P457
  • [9] EKINS RP, 1991, CLIN CHEM, V37, P1955
  • [10] Use of cDNA microarrays to analyze dioxin-induced changes in human liver gene expression
    Frueh, FW
    Hayashibara, KC
    Brown, PO
    Whitlock, JP
    [J]. TOXICOLOGY LETTERS, 2001, 122 (03) : 189 - 203