Genetic variants of parvovirus B19 identified in the United Kingdom: Implications for diagnostic testing

被引:40
作者
Cohen, B. J. [1 ]
Gandhi, J. [1 ]
Clewley, J. P. [1 ]
机构
[1] Hlth Protect Agcy, Virus Reference Dept, Ctr Infect, London NW9 5EQ, England
关键词
parvovirus B19 variants; genotype; 2; A6; 3; V9; phylogeny;
D O I
10.1016/j.jcv.2006.01.011
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Background: Discrepant results in diagnostic parvovirus B19 PCR assays have been observed with strains showing nucleotide sequence variation. Objectives and study design: To perform phylogenetic analysis on two parvovirus B 19 strains that gave discrepant PCR results. Results: One strain was found to be genotype 2; the second strain was genotype 3. Conclusions: Parvovirus B19 genotypes 2 and 3 strains were identified in diagnostic samples of UK origin following the investigation of discrepant PCR results. More structured investigations are needed to estimate the prevalence of these variants. In the meantime, diagnostic PCR results should be interpreted cautiously when they are at variance with serological testing. Manufacturers of PCR kits for the detection of B 19 sequences will need to consider re-designing their primers. (c) 2006 Elsevier B.V. All rights reserved.
引用
收藏
页码:152 / 155
页数:4
相关论文
共 21 条
[1]   Cloning of a human parvovirus by molecular screening of respiratory tract samples [J].
Allander, T ;
Tammi, MT ;
Eriksson, M ;
Bjerkner, A ;
Tiveljung-Lindell, A ;
Andersson, B .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (36) :12891-12896
[2]   Evaluation of different assays for the detection of parvovirus B19 DNA in human plasma [J].
Baylis, SA ;
Shah, N ;
Minor, PD .
JOURNAL OF VIROLOGICAL METHODS, 2004, 121 (01) :7-16
[3]   Characterization of parvovirus B19 genotype 2 in KU812Ep6 cells [J].
Blümel, J ;
Eis-Hübinger, AM ;
Stühler, A ;
Bönsch, C ;
Gessner, M ;
Löwer, J .
JOURNAL OF VIROLOGY, 2005, 79 (22) :14197-14206
[4]   Evaluation of the Roche LightCycler parvovirus B19 quantification kit for the diagnosis of parvovirus B19 infections [J].
Braham, S ;
Gandhi, J ;
Beard, S ;
Cohen, B .
JOURNAL OF CLINICAL VIROLOGY, 2004, 31 (01) :5-10
[5]   AN AMPLIFIED ELISA FOR THE DETECTION OF PARVOVIRUS-B19 IGM USING MONOCLONAL-ANTIBODY TO FITC [J].
BROWN, KE ;
BUCKLEY, MM ;
COHEN, BJ ;
SAMUEL, D .
JOURNAL OF VIROLOGICAL METHODS, 1989, 26 (02) :189-198
[6]   Identification and characterization of persistent human erythrovirus infection in blood donor samples [J].
Candotti, D ;
Etiz, N ;
Parsyan, A ;
Allain, JP .
JOURNAL OF VIROLOGY, 2004, 78 (22) :12169-12178
[7]  
Clewley Jonathan P., 1993, P367
[8]   Genetic diversity of human parvovirus B19: Sequence analysis of the VP1/VP2 gene from multiple isolates [J].
Erdman, DD ;
Durigon, EL ;
Wang, QY ;
Anderson, LJ .
JOURNAL OF GENERAL VIROLOGY, 1996, 77 :2767-2774
[9]   EXTENT OF SEQUENCE VARIABILITY IN A GENOMIC REGION CODING FOR CAPSID PROTEINS OF B19 PARVOVIRUS [J].
GALLINELLA, G ;
VENTUROLI, S ;
GENTILOMI, G ;
MUSIANI, M ;
ZERBINI, M .
ARCHIVES OF VIROLOGY, 1995, 140 (06) :1119-1125
[10]   Sequence analysis of a parvovirus B19 isolate and baculovirus expression of the non-structural protein [J].
Hicks, KE ;
Cubel, RCN ;
Cohen, BJ ;
Clewley, JP .
ARCHIVES OF VIROLOGY, 1996, 141 (07) :1319-1327