Prediction and interpretation of distributed neural activity with sparse models

被引:122
作者
Carroll, Melissa K. [2 ]
Cecchi, Guillermo A. [1 ]
Rish, Irina [1 ]
Garg, Rahul [1 ]
Rao, A. Ravishankar [1 ]
机构
[1] IBM Corp, Thomas J Watson Res Ctr, Computat Biol Ctr, Yorktown Hts, NY 10598 USA
[2] Princeton Univ, Dept Comp Sci, Princeton, NJ 08540 USA
关键词
RESONANCE-IMAGING FMRI; VARIABLE SELECTION; WORKING-MEMORY; REGRESSION; CORTEX; LASSO;
D O I
10.1016/j.neuroimage.2008.08.020
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
We explore to what extent the combination of predictive and interpretable modeling can provide new insights for functional brain imaging. For this, we apply a recently introduced regularized regression technique, the Elastic Net, to the analysis of the PBAIC 2007 competition data. Elastic Net regression controls via one parameter the number of voxels in the resulting model, and via another the degree to which correlated voxels are included. We find that this method produces highly predictive models of fMRI data that provide evidence for the distributed nature of neural function. We also use the flexibility of Elastic Net to demonstrate that model robustness can be improved without compromising predictability, in turn revealing the importance of localized clusters of activity. Our findings highlight the functional significance of patterns of distributed clusters of localized activity, and underscore the importance of models that are both predictive and interpretable. (C) 2008 Elsevier Inc. All rights reserved.
引用
收藏
页码:112 / 122
页数:11
相关论文
共 21 条
[1]  
[Anonymous], 2000, Spatial Tesselations: Concepts and Applications of Voronoi Diagrams
[2]  
Calhoun VD, 2003, 4 INT S IND COMP AN
[3]   Physiological characteristics of capacity constraints in working memory as revealed by functional MRI [J].
Callicott, JH ;
Mattay, VS ;
Bertolino, A ;
Finn, K ;
Coppola, R ;
Frank, JA ;
Goldberg, TE ;
Weinberger, DR .
CEREBRAL CORTEX, 1999, 9 (01) :20-26
[4]  
CHIGIREV D, 2006, 12 HBM M FLOR IT
[5]   Functional magnetic resonance imaging (fMRI) "brain reading": detecting and classifying distributed patterns of fMRI activity in human visual cortex [J].
Cox, DD ;
Savoy, RL .
NEUROIMAGE, 2003, 19 (02) :261-270
[6]   The role of working memory in visual selective attention [J].
de Fockert, JW ;
Rees, G ;
Frith, CD ;
Lavie, N .
SCIENCE, 2001, 291 (5509) :1803-1806
[7]   Least angle regression - Rejoinder [J].
Efron, B ;
Hastie, T ;
Johnstone, I ;
Tibshirani, R .
ANNALS OF STATISTICS, 2004, 32 (02) :494-499
[8]   Variable selection via nonconcave penalized likelihood and its oracle properties [J].
Fan, JQ ;
Li, RZ .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2001, 96 (456) :1348-1360
[9]   IMPROVED ASSESSMENT OF SIGNIFICANT ACTIVATION IN FUNCTIONAL MAGNETIC-RESONANCE-IMAGING (FMRI) - USE OF A CLUSTER-SIZE THRESHOLD [J].
FORMAN, SD ;
COHEN, JD ;
FITZGERALD, M ;
EDDY, WF ;
MINTUN, MA ;
NOLL, DC .
MAGNETIC RESONANCE IN MEDICINE, 1995, 33 (05) :636-647
[10]   A STATISTICAL VIEW OF SOME CHEMOMETRICS REGRESSION TOOLS [J].
FRANK, IE ;
FRIEDMAN, JH .
TECHNOMETRICS, 1993, 35 (02) :109-135