From genome to bedside: Are we lost in translation?

被引:10
作者
Hayes, Daniel F. [1 ]
机构
[1] Univ Michigan, Ctr Comprehens Canc, Ann Arbor, MI 48109 USA
关键词
Tumor biomarker tests; Omics-based tests; PATHOLOGISTS GUIDELINE RECOMMENDATIONS; REPORTING RECOMMENDATIONS; ADJUVANT THERAPY; BREAST-CANCER; AMERICAN-SOCIETY; ESTROGEN-RECEPTOR; RECURRENCE SCORE; TRIAL DESIGNS; TUMOR-MARKERS; CHEMOTHERAPY;
D O I
10.1016/j.breast.2013.07.004
中图分类号
R73 [肿瘤学];
学科分类号
100214 [肿瘤学];
摘要
The preceding decade has seen a remarkable technical explosion resulting in an entirely new field designated as "omics". A committee convened by the United States Institute of Medicine (IOM) has defined omics as "characterization of global sets of biological molecules such as DNAs, RNAs, proteins, and metabolites". The IOM report has established a roadmap for translating a newly discovered signature that emerges from an omics-based exploratory study to a true, analytically valid test that has both clinical validity and clinical utility for a specific intended use. This roadmap requires a multi-disciplinary team with expertise in the technical aspects of high-throughput assay development, bioinformatics, clinical test development, and clinical research and statistics. The investigative team should follow one of the pathways laid out by the IOM committee to establish clinical utility of an analytically validated omics-based test, and therefore acceptance by regulatory and guideline bodies: Prospective retrospective studies, or prospective studies in which the omics-based test is the primary objective of the trial itself. Although developed for omics-based tests, these concepts are applicable to any diagnostic test used to direct care of patients with cancer. These pathways are rigorous, and therefore not easily accomplished. However, if we are to apply these tests to direct management of our patients, we must approach the science of biomarker development with the same rigor that is used for therapeutic agent assessment. A "Bad Tumor Marker Is as Bad as a Bad Drug". (C) 2013 Elsevier Ltd. All rights reserved.
引用
收藏
页码:S22 / S26
页数:5
相关论文
共 52 条
[1]
Abe O, 2005, LANCET, V366, P2087, DOI 10.1016/s0140-6736(05)66544-0
[2]
Comparisons between different polychemotherapy regimens for early breast cancer: meta-analyses of long-term outcome among 100 000 women in 123 randomised trials [J].
Albain, K. ;
Anderson, S. ;
Arriagada, R. ;
Barlow, W. ;
Bergh, J. ;
Bliss, J. ;
Buyse, M. ;
Cameron, D. ;
Carrasco, E. ;
Clarke, M. ;
Correa, C. ;
Coates, A. ;
Collins, R. ;
Costantino, J. ;
Cutter, D. ;
Cuzick, J. ;
Darby, S. ;
Davidson, N. ;
Davies, C. ;
Davies, K. ;
Delmestri, A. ;
Di Leo, A. ;
Dowsett, M. ;
Elphinstone, P. ;
Evans, V. ;
Ewertz, M. ;
Gelber, R. ;
Gettins, L. ;
Geyer, C. ;
Goldhirsch, A. ;
Godwin, J. ;
Gray, R. ;
Gregory, C. ;
Hayes, D. ;
Hill, C. ;
Ingle, J. ;
Jakesz, R. ;
James, S. ;
Kaufmann, M. ;
Kerr, A. ;
MacKinnon, E. ;
McGale, P. ;
McHugh, T. ;
Norton, L. ;
Ohashi, Y. ;
Paik, S. ;
Pan, H. C. ;
Perez, E. ;
Peto, R. ;
Piccart, M. .
LANCET, 2012, 379 (9814) :432-444
[3]
Prognostic and predictive value of the 21-gene recurrence score assay in postmenopausal women with node-positive, oestrogen-receptor-positive breast cancer on chemotherapy: a retrospective analysis of a randomised trial [J].
Albain, Kathy S. ;
Barlow, William E. ;
Shak, Steven ;
Hortobagyi, Gabriel N. ;
Livingston, Robert B. ;
Yeh, I-Tien ;
Ravdin, Peter ;
Bugarini, Roberto ;
Boehner, Frederick L. ;
Davidson, Nancy E. ;
Sledge, George W. ;
Winer, Eric P. ;
Hudis, Clifford ;
Ingle, James N. ;
Perez, Edith A. ;
Pritchard, Kathleen I. ;
Shepherd, Lois ;
Gralow, Julie R. ;
Yoshizawa, Carl ;
Allred, D. Craig ;
Osborne, C. Kent ;
Hayes, Daniel F. .
LANCET ONCOLOGY, 2010, 11 (01) :55-65
[4]
Primer: an evidence-based approach to prognostic markers [J].
Altman, DG ;
Riley, RD .
NATURE CLINICAL PRACTICE ONCOLOGY, 2005, 2 (09) :466-472
[5]
Methodological challenges in the evaluation of prognostic factors in breast cancer [J].
Altman, DG ;
Lyman, GH .
BREAST CANCER RESEARCH AND TREATMENT, 1998, 52 (1-3) :289-303
[6]
Altman DG, 2000, STAT MED, V19, P453, DOI 10.1002/(SICI)1097-0258(20000229)19:4<453::AID-SIM350>3.3.CO
[7]
2-X
[8]
Diagnostic (STARD) and prognostic (REMARK) studies [J].
Altman, Douglas G. ;
Bossuyt, Patrick M. M. .
MEDICINA CLINICA, 2005, 125 :49-55
[9]
Biomarker studies: a call for a comprehensive biomarker study registry [J].
Andre, Fabrice ;
McShane, Lisa M. ;
Michiels, Stefan ;
Ransohoff, David F. ;
Altman, Douglas G. ;
Reis-Filho, Jorge S. ;
Hayes, Daniel F. ;
Pusztai, Lajos .
NATURE REVIEWS CLINICAL ONCOLOGY, 2011, 8 (03) :171-176
[10]
Effect of screening and adjuvant therapy on mortality from breast cancer [J].
Berry, DA ;
Cronin, KA ;
Plevritis, SK ;
Fryback, DG ;
Clarke, L ;
Zelen, M ;
Mandelblatt, JS ;
Yakovlev, AY ;
Habbema, JDF ;
Feuer, EJ .
NEW ENGLAND JOURNAL OF MEDICINE, 2005, 353 (17) :1784-1792