Sensitive and robust detection of citrus greening (huanglongbing) bacterium "Candidatus Liberibacter asiaticus" by DNA amplification with new 16S rDNA-specific primers

被引:57
作者
Fujikawa, Takashi [1 ]
Iwanami, Toru [1 ]
机构
[1] Natl Inst Fruit Tree Sci NIFTS, Tsukuba, Ibaraki 3058605, Japan
关键词
Citrus greening; Huanglongbing; Liberibacter asiaticus; DNA amplification; 16S rDNA; Diagnosis; SAO-PAULO STATE; MULTIPLE SEQUENCE ALIGNMENT; PCR DETECTION; DISEASE; AMERICANUS; AFRICANUS; BRAZIL; TREE;
D O I
10.1016/j.mcp.2012.06.001
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Citrus greening disease is caused by "Candidatus Liberibacter spp.,"including "Candidatus Liberibacter asiaticus (Las)." For detecting this disease, we designed new primers from the Las 16S rDNA and used a very small DNA template for PCR. More Las-infected tissues were detected with our primers than with the common primers. (c) 2012 Elsevier Ltd. All rights reserved.
引用
收藏
页码:194 / 197
页数:4
相关论文
共 22 条
[1]  
[Anonymous], 2010, COMM STRAT PLANN FLO
[2]  
Bové JM, 2006, J PLANT PATHOL, V88, P7
[3]   Influence of DNA extraction methods, PCR inhibitors and quantification methods on real-time PCR assay of biotechnology-derived traits [J].
Demeke, Tigst ;
Jenkins, G. Ronald .
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2010, 396 (06) :1977-1990
[4]   Complete Genome Sequence of Citrus Huanglongbing Bacterium, 'Candidatus Liberibacter asiaticus' Obtained Through Metagenomics [J].
Duan, Yongping ;
Zhou, Lijuan ;
Hall, David G. ;
Li, Wenbin ;
Doddapaneni, Harshavardhan ;
Lin, Hong ;
Liu, Li ;
Vahling, Cheryl M. ;
Gabriel, Dean W. ;
Williams, Kelly P. ;
Dickerman, Allan ;
Sun, Yijun ;
Gottwald, Tim .
MOLECULAR PLANT-MICROBE INTERACTIONS, 2009, 22 (08) :1011-1020
[5]   Sequence homogeneity of the ψserA-trmU-tufB-secE-nusG-rplKAJL-rpoB gene cluster and the flanking regions of 'Candidatus Liberibacter asiaticus' isolates around Okinawa Main Island in Japan [J].
Furuya, Noriko ;
Matsukura, Keiichiro ;
Tomimura, Kenta ;
Okuda, Mitsuru ;
Miyata, Shin-ichi ;
Iwanami, Toru .
JOURNAL OF GENERAL PLANT PATHOLOGY, 2010, 76 (02) :122-131
[6]   Genomic characterization of a liberibacter present in an ornamental rutaceous tree, Calodendrum capense, in the Western Cape province of South Africa.: Proposal of 'Candidatus Liberibacter africanus subsp capensis' [J].
Garnier, M ;
Jagoueix-Eveillard, S ;
Cronje, PR ;
Le Roux, HF ;
Bové, JM .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 :2119-2125
[7]  
Garnier M., 1996, P 13 C INT ORG CITRU, P388, DOI 10.5070/c58v467619
[8]  
Halbert S.E., 2005, P 2 INT CITR CANK HU, pH
[9]   Detection and identification of the two Candidatus Liberobacter species associated with citrus huanglongbing by PCR amplification of ribosomal protein genes of the β operon [J].
Hocquellet, A ;
Toorawa, P ;
Bové, JM ;
Garnier, M .
MOLECULAR AND CELLULAR PROBES, 1999, 13 (05) :373-379
[10]   Long PCR is a sensitive method for detecting Liberobacter asiaticum in parasitoids undergoing risk assessment in quarantine [J].
Hoy, MA ;
Jeyaprakash, A ;
Nguyen, R .
BIOLOGICAL CONTROL, 2001, 22 (03) :278-287