Recruitment of the RNA Helicase RHAU to Stress Granules via a Unique RNA-binding Domain

被引:89
作者
Chalupnikova, Katerina [1 ]
Lattmann, Simon [1 ]
Selak, Nives [1 ]
Iwamoto, Fumiko [1 ]
Fujiki, Yukio [2 ]
Nagamine, Yoshikuni [1 ]
机构
[1] Novartis Res Fdn, Friedrich Miescher Inst Biomed Res, CH-4058 Basel, Switzerland
[2] Kyushu Univ, Fac Sci, Dept Biol, Fukuoka 8128581, Japan
关键词
D O I
10.1074/jbc.M804857200
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In response to environmental stress, the translation machinery of cells is reprogrammed. The majority of actively translated mRNAs are released from polysomes and driven to specific cytoplasmic foci called stress granules (SGs) where dynamic changes in protein-RNA interaction determine the subsequent fate of mRNAs. Here we show that the DEAH box RNA helicase RHAU is a novel SG-associated protein. Although RHAU protein was originally identified as an AU-rich element-associated protein involved in urokinase-type plasminogen activator mRNA decay, it was not clear whether RHAU could directly interact with RNA. We have demonstrated that RHAU physically interacts with RNA in vitro and in vivo through a newly identified N-terminal RNA-binding domain, which was found to be both essential and sufficient for RHAU localization in SGs. We have also shown that the ATPase activity of RHAU plays a role in the RNA interaction and in the regulation of protein retention in SGs. Thus, our results show that RHAU is the fourth RNA helicase detected in SGs, after rck/p54, DDX3, and eIF4A, and that its association with SGs is dynamic and mediated by an RHAU-specific RNA-binding domain.
引用
收藏
页码:35186 / 35198
页数:13
相关论文
共 51 条
[41]   RNABindR: a server for analyzing and predicting RNA-binding sites in proteins [J].
Terribilini, Michael ;
Sander, Jeffry D. ;
Lee, Jae-Hyung ;
Zaback, Peter ;
Jernigan, Robert L. ;
Honavar, Vasant ;
Dobbs, Drena .
NUCLEIC ACIDS RESEARCH, 2007, 35 :W578-W584
[42]   Cooperative binding of ATP and RNA induces a closed conformation in a DEAD box RNA helicase [J].
Theissen, Bettina ;
Karow, Anne R. ;
Koehler, Juergen ;
Gubaev, Airat ;
Klostermeier, Dagmar .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (02) :548-553
[43]   RISP: A web-based server for prediction of RNA-binding sites in proteins [J].
Tong, Jing ;
Jiang, Peng ;
Lu, Zu-hong .
COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, 2008, 90 (02) :148-153
[44]   RETRACTED: The RasGAP-associated endoribonuclease G3BP assembles stress granules (Retracted Article) [J].
Tourrière, H ;
Chebli, K ;
Zekri, L ;
Courselaud, B ;
Blanchard, JM ;
Bertrand, E ;
Tazi, J .
JOURNAL OF CELL BIOLOGY, 2003, 160 (06) :823-831
[45]   Facilitation of mRNA deadenylation and decay by the exosome-bound, DExH protein RHAU [J].
Tran, H ;
Schilling, M ;
Wirbelauer, C ;
Hess, D ;
Nagamine, Y .
MOLECULAR CELL, 2004, 13 (01) :101-111
[46]   CLIP: A method for identifying protein-RNA interaction sites in living cells [J].
Ule, J ;
Jensen, K ;
Mele, A ;
Darnell, RB .
METHODS, 2005, 37 (04) :376-386
[47]   Transport signals and transcription-dependent nuclear localization of the putative DEAD-box helicase MDDX28 [J].
Valgardsdottir, R ;
Prydz, H .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (23) :21146-21154
[48]   The DEXH protein product of the DHX36 gene is the major source of tetramolecular quadruplex G4-DNA resolving activity in HeLa cell lysates [J].
Vaughn, JP ;
Creacy, SD ;
Routh, ED ;
Joyner-Butt, C ;
Jenkins, GS ;
Pauli, S ;
Nagamine, Y ;
Akman, SA .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (46) :38117-38120
[49]   The DEAH-box protein PRP22 is an ATPase that mediates ATP-dependent mRNA release from the spliceosome and unwinds RNA duplexes [J].
Wagner, JDO ;
Jankowsky, E ;
Company, M ;
Pyle, AM ;
Abelson, JN .
EMBO JOURNAL, 1998, 17 (10) :2926-2937
[50]   PRP16, a DEAH-box RNA helicase, is recruited to the spliceosome primarily via its nonconserved N-terminal domain [J].
Wang, Y ;
Guthrie, C .
RNA, 1998, 4 (10) :1216-1229