Parameterisation of Keeling's network generation algorithm

被引:8
作者
Badham, Jennifer [1 ]
Abbass, Hussein [1 ]
Stocker, Rob [1 ]
机构
[1] Australian Def Force Acad, Sch ITEE, Artificial Life & Adapt Robot Lab, Canberra, ACT 2600, Australia
关键词
disease spread; transmission networks; clustering; assortativity; social networks;
D O I
10.1016/j.tpb.2008.06.002
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Simulation is increasingly being used to examine epidemic behaviour and assess potential management options. The utility of the simulations rely on the ability to replicate those aspects of the social structure that are relevant to epidemic transmission. One approach is to generate networks with desired social properties. Recent research by Keeling and his colleagues has generated simulated networks with a range of properties, and examined the impact of these properties on epidemic processes occurring over the network. However, published work has included only limited analysis of the algorithm itself and the way in which the network properties are related to the algorithm parameters. This paper identifies some relationships between the algorithm parameters and selected network properties (mean degree, degree variation, clustering coefficient and assortativity). Our approach enables users of the algorithm to efficiently generate a network with given properties, thereby allowing realistic social networks to be used as the basis of epidemic simulations. Alternatively, the algorithm could be used to generate social networks with a range of property values, enabling analysis of the impact of these properties on epidemic behaviour. (C) 2008 Elsevier Inc. All rights reserved.
引用
收藏
页码:161 / 166
页数:6
相关论文
共 22 条
[1]   Emergence of scaling in random networks [J].
Barabási, AL ;
Albert, R .
SCIENCE, 1999, 286 (5439) :509-512
[2]  
Batagelj V., 1998, Connections, V21, P47
[3]   CARRIER-BORN EPIDEMICS IN A COMMUNITY CONSISTING OF DIFFERENT GROUPS [J].
BECKER, N .
JOURNAL OF APPLIED PROBABILITY, 1973, 10 (03) :491-501
[4]   Modeling dynamic and network heterogeneities in the spread of sexually transmitted diseases [J].
Eames, KTD ;
Keeling, MJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (20) :13330-13335
[5]  
ERDOS P, 1960, B INT STATIST INST, V38, P343
[6]  
EUBANK S, 2006, STRUCTURE SOCIAL CON
[7]   NETWORKS OF SEXUAL CONTACTS - IMPLICATIONS FOR THE PATTERN OF SPREAD OF HIV [J].
GUPTA, S ;
ANDERSON, RM ;
MAY, RM .
AIDS, 1989, 3 (12) :807-817
[8]   Lethality and centrality in protein networks [J].
Jeong, H ;
Mason, SP ;
Barabási, AL ;
Oltvai, ZN .
NATURE, 2001, 411 (6833) :41-42
[9]   AN ALGORITHM FOR DRAWING GENERAL UNDIRECTED GRAPHS [J].
KAMADA, T ;
KAWAI, S .
INFORMATION PROCESSING LETTERS, 1989, 31 (01) :7-15
[10]   The implications of network structure for epidemic dynamics [J].
Keeling, M .
THEORETICAL POPULATION BIOLOGY, 2005, 67 (01) :1-8