Mutational spaces for leaf shape and size

被引:43
作者
Bensmihen, Sandra [1 ]
Hanna, Andrew I. [2 ]
Langlade, Nicolas B. [1 ]
Micol, Jose Luis [3 ,4 ]
Bangham, Andrew [2 ]
Coen, Enrico S. [1 ]
机构
[1] John Innes Ctr, Norwich NR4 7UH, Norfolk, England
[2] Univ E Anglia, Sch Comp Sci, Norwich NR4 7TJ, Norfolk, England
[3] Univ Miguel Hernandez, Div Genet, Alicante 02302, Spain
[4] Univ Miguel Hernandez, Inst Bioingn, Alicante 02302, Spain
来源
HFSP JOURNAL | 2008年 / 2卷 / 02期
基金
英国生物技术与生命科学研究理事会;
关键词
D O I
10.2976/1.2836738
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
A key approach to understanding how genes control growth and form is to analyze mutants in which shape and size have been perturbed. Although many mutants of this kind have been described in plants and animals, a general quantitative framework for describing them has yet to be established. Here we describe an approach based on Principal Component Analysis of organ landmarks and outlines. Applying this method to a collection of leaf shape mutants in Arabidopsis and Antirrhinum allows low-dimensional spaces to be constructed that capture the key variations in shape and size. Mutant phenotypes can be represented as vectors in these allometric spaces, allowing additive gene interactions to be readily described. The principal axis of each allometric space reflects size variation and an associated shape change. The shape change is similar to that observed during the later stages of normal development, suggesting that many phenotypic differences involve modulations in the timing of growth arrest. Comparison between allometric mutant spaces from different species reveals a similar range of phenotypic possibilities. The spaces therefore provide a general quantitative framework for exploring and comparing the development and evolution of form.
引用
收藏
页码:110 / 120
页数:11
相关论文
共 42 条
[1]   The HVE/CAND1 gene is required for the early patterning of leaf venation in Arabidopsis [J].
Alonso-Peral, Maria Magdalena ;
Candela, Hector ;
del Pozo, Juan Carlos ;
Martinez-Laborda, Antonio ;
Ponce, Maria Rosa ;
Micol, Jose Luis .
DEVELOPMENT, 2006, 133 (19) :3755-3766
[2]   Response of cassava to water deficit: Leaf area growth and abscisic acid [J].
Alves, AAC ;
Setter, TL .
CROP SCIENCE, 2000, 40 (01) :131-137
[3]  
Anderson E, 1999, LAPACK USERS GUIDE
[4]   Cell numbers and leaf development in Arabidopsis:: a functional analysis of the STRUWWELPETER gene [J].
Autran, D ;
Jonak, C ;
Belcram, K ;
Beemster, GTS ;
Kronenberger, J ;
Grandjean, O ;
Inzé, D ;
Traas, J .
EMBO JOURNAL, 2002, 21 (22) :6036-6049
[5]   A mutational analysis of the ABA1 gene of Arabidopsis thaliana highlights the involvement of ABA in vegetative development [J].
Barrero, JM ;
Piqueras, P ;
González-Guzmán, M ;
Serrano, R ;
Rodríguez, PL ;
Ponce, MR ;
Micol, JL .
JOURNAL OF EXPERIMENTAL BOTANY, 2005, 56 (418) :2071-2083
[6]   INCURVATA2 encodes the catalytic subunit of DNA polymerase α and interacts with genes involved in chromatin-mediated cellular memory in Arabidopsis thaliana [J].
Barrero, Jose Maria ;
Gonzalez-Bayon, Rebeca ;
del Pozo, Juan Carlos ;
Ponce, Maria Rosa ;
Micol, Jose Luis .
PLANT CELL, 2007, 19 (09) :2822-2838
[7]   Cell cycle:: the key to plant growth control? [J].
Beemster, GTS ;
Fiorani, F ;
Inzé, D .
TRENDS IN PLANT SCIENCE, 2003, 8 (04) :154-158
[8]  
Berná G, 1999, GENETICS, V152, P729
[9]   Asymmetric leaves1 mediates leaf patterning and stem cell function in Arabidopsis [J].
Byrne, ME ;
Barley, R ;
Curtis, M ;
Arroyo, JM ;
Dunham, M ;
Hudson, A ;
Martienssen, RA .
NATURE, 2000, 408 (6815) :967-971
[10]   A brassinosteroid-insensitive mutant in Arabidopsis thaliana exhibits multiple defects in growth and development [J].
Clouse, SD ;
Langford, M ;
McMorris, TC .
PLANT PHYSIOLOGY, 1996, 111 (03) :671-678