mmsearch:: a motif arrangement language and search program

被引：5

作者：

Junier, T

Pagni, M

Bucher, P

机构：

来源：

BIOINFORMATICS | 2001年 / 17卷 / 12期

关键词：

D O I：

10.1093/bioinformatics/17.12.1234

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

This paper presents a language for describing arrangements of motifs in biological sequences, and a program that uses the language to find the arrangements in motif match databases. The program does not by itself search for the constituent motifs, and is thus independent of how they are detected, which allows it to use motif match data of various origins.

引用

页码：1234 / 1235

页数：2

共 5 条

[1]

Bateman A, 2004, NUCLEIC ACIDS RES, V32, pD138, DOI [10.1093/nar/gkp985, 10.1093/nar/gkh121, 10.1093/nar/gkr1065]

[2]

Grundy WN, 1997, COMPUT APPL BIOSCI, V13, P397

[3] The PROSITE database, its status in 1999 [J].