A toolkit for capturing and sharing FuGE experiments

被引：7

作者：

Belhajjame, Khalid ^{[1
]}

Jones, Andrew R. ^{[2
]}

Paton, Norman W. ^{[1
]}

机构：

[1] Univ Manchester, Sch Comp Sci, Manchester M13 9PL, Lancs, England

[2] Univ Liverpool, Fac Vet Sci, Dept Preclin & Vet Sci, Liverpool L69 7ZJ, Merseyside, England

来源：

BIOINFORMATICS | 2008年 / 24卷 / 22期

基金：

英国生物技术与生命科学研究理事会;

关键词：

D O I：

10.1093/bioinformatics/btn496

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Motivation: The Functional Genomics Experiment Object Model (FuGE) supports modelling of experimental processes either directly or through extensions that specialize FuGE for use in specific contexts. FuGE applications commonly include components that capture, store and search experiment descriptions, where the requirements of different applications have much in common. Results: We describe a toolkit that supports data capture, storage and web-based search of FuGE experiment models; the toolkit can be used directly on FuGE compliant models or configured for use with FuGE extensions. The toolkit is illustrated using a FuGE extension standardized by the proteomics standards initiative, namely GelML.

引用

页码：2647 / 2649

页数：3

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