Amino acid contribution to protein solubility: Asp, Glu, and Ser contribute more favorably than the other hydrophilic amino acids in RNase Sa

被引:193
作者
Trevino, Saul R.
Scholtz, J. Martin [1 ]
Pace, C. Nick
机构
[1] Texas A&M Univ, Dept Mol & Cellular Med, College Stn, TX 77843 USA
[2] Texas A&M Univ, Dept Biochem & Biophys, College Stn, TX 77843 USA
关键词
protein solubility; amino acid hydrophobicity; amino acid hydration; halophilic adaptation; beta-turn stability;
D O I
10.1016/j.jmb.2006.10.026
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Poor protein solubility is a common problem in high-resolution structural studies, formulation of protein pharmaceuticals, and biochemical characterization of proteins. One popular strategy to improve protein solubility is to use site-directed mutagenesis to make hydrophobic to hydrophilic mutations on the protein surface. However, a systematic investigation of the relative contributions of all 20 amino acids to protein solubility has not been done. Here, 20 variants at the completely solvent-exposed position 76 of ribonuclease (RNase) Sa are made to compare the contributions of each amino acid. Stability measurements were also made for these variants, which occur at the i + 1 position of a type II beta-turn. Solubility measurements in ammonium sulfate solutions were made at high positive net charge, low net charge, and high negative net charge. Surprisingly, there was a wide range of contributions to protein solubility even among the hydrophilic amino acids. The results suggest that aspartic acid, glutamic acid, and serine contribute significantly more favorably than the other hydrophilic amino acids especially at high net charge. Therefore, to increase protein solubility, asparagine, glutamine, or threonine should be replaced with aspartic acid, glutamic acid or serine. (c) 2006 Elsevier Ltd. All rights reserved.
引用
收藏
页码:449 / 460
页数:12
相关论文
共 73 条
[1]   Soluble, oligomeric, and ligand-binding extracellular domain of the human α7 acetylcholine receptor expressed in yeast -: Replacement of the hydrophobic cysteine loop by the hydrophilic loop of the ACh-binding protein enhances protein solubility [J].
Avramopoulou, V ;
Mamalaki, A ;
Tzartos, SJ .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (37) :38287-38293
[2]   Optimization of protein solubility and stability for protein nuclear magnetic resonance [J].
Bagby, S ;
Tong, KI ;
Ikura, M .
NUCLEAR MAGNETIC RESONANCE OF BIOLOGICAL MACROMOLECULES, PT B, 2001, 339 :20-41
[3]   How Hofmeister ion interactions affect protein stability [J].
Baldwin, RL .
BIOPHYSICAL JOURNAL, 1996, 71 (04) :2056-2063
[4]   Analysis of protein solvent interactions in glucose dehydrogenase from the extreme halophile Haloferax mediterranei [J].
Britton, KL ;
Baker, PJ ;
Fisher, M ;
Ruzheinikov, S ;
Gilmour, DJ ;
Bonete, MJ ;
Ferrer, J ;
Pire, C ;
Esclapez, J ;
Rice, DW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (13) :4846-4851
[5]  
BROUET JC, 1974, AM J MED, V57, P775, DOI 10.1016/0002-9343(74)90852-3
[6]  
BUNN HF, 1986, HEMOGLOBIN MOL GENET, P381
[7]   BEHAVIOR OF AMINO-ACIDS IN GEL-PERMEATION CHROMATOGRAPHY - CORRELATION WITH THE EFFECT OF HOFMEISTER SOLUTES ON THE CONFORMATIONAL STABILITY OF MACROMOLECULES [J].
CACACE, MG ;
SANTIN, M ;
SADA, A .
JOURNAL OF CHROMATOGRAPHY, 1990, 510 :41-46
[8]  
Caldwell Gary W., 2001, Current Topics in Medicinal Chemistry, V1, P353, DOI 10.2174/1568026013394949
[9]  
Christendat D, 2000, NAT STRUCT BIOL, V7, P903
[10]   Charge density-dependent strength of hydration and biological structure [J].
Collins, KD .
BIOPHYSICAL JOURNAL, 1997, 72 (01) :65-76