Redundancy and rewiring of genetic networks following genome-wide duplication events

被引:106
作者
De Smet, Riet [1 ,2 ]
Van de Peer, Yves [1 ,2 ]
机构
[1] Univ Ghent VIB, Dept Plant Syst Biol, B-9052 Ghent, Belgium
[2] Univ Ghent, Dept Plant Biotechnol & Bioinformat, B-9052 Ghent, Belgium
关键词
ALTERNATIVE SPLICING PATTERNS; FUNCTIONAL DIVERGENCE; EXPRESSION PATTERN; WHOLE-GENOME; TRANSCRIPTION FACTORS; METABOLIC NETWORK; EVOLUTION; ARABIDOPSIS; POLYPLOIDY; YEAST;
D O I
10.1016/j.pbi.2012.01.003
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Polyploidy or whole-genome duplication is a frequent phenomenon within the plant kingdom and has been associated with the occurrence of evolutionary novelty and increase in biological complexity. Because genome-wide duplication events duplicate whole molecular networks it is of interest to investigate how these networks evolve subsequent to such events. Although genome duplications are generally followed by massive gene loss, at least part of the network is usually retained in duplicate and can rewire to execute novel functions. Alternatively, the network can remain largely redundant and as such confer robustness against mutations. The increasing availability of high-throughput data makes it possible to study evolution following whole genome duplication events at the network level. Here we discuss how the use of 'omics' data in network analysis can provide novel insights on network redundancy and rewiring and conclude with some directions for future research.
引用
收藏
页码:168 / 176
页数:9
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