The cation-dependent G-proteins: In a class of their own

被引:32
作者
Ash, Miriam-Rose [1 ]
Maher, Megan J. [2 ]
Guss, J. Mitchell [1 ]
Jormakka, Mika [3 ]
机构
[1] Univ Sydney, Sch Mol Biosci, Sydney, NSW 2006, Australia
[2] La Trobe Univ, La Trobe Inst Mol Sci, Melbourne, Vic, Australia
[3] Univ Sydney, Sydney Med Sch, Sydney, NSW 2006, Australia
基金
英国医学研究理事会;
关键词
Cation-dependent GTPase; Potassium stimulation; GTPase activation; G-protein classification; Ribosome-assembly GTPase; Dynamin-like GTPase; GTP-BINDING PROTEIN; 50-S RIBOSOMAL-SUBUNIT; BACILLUS-SUBTILIS; ESCHERICHIA-COLI; SULFOLOBUS-SOLFATARICUS; CATALYTIC MACHINERY; THERMOTOGA-MARITIMA; CRYSTAL-STRUCTURE; STRUCTURAL BASIS; UPTAKE SYSTEM;
D O I
10.1016/j.febslet.2012.06.030
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
G-proteins are some of the most important and abundant enzymes, yet their intrinsic nucleotide hydrolysis reaction is notoriously slow and must be accelerated in vivo. Recent experiments on dynamin and GTPases involved in ribosome assembly have demonstrated that their hydrolysis activities are stimulated by potassium ions. This article presents the hypothesis that cation-mediated activation of G-proteins is more common than currently realised, and that such GTPases represent a structurally and functionally unique class of G-proteins. Based on sequence analysis we provide a list of predicted cation-dependent GTPases, which encompasses almost all members of the TEES, Obg-HflX, YqeH-like and dynamin superfamilies. The results from this analysis effectively re-define the conditions under which many of these G-proteins should be studied in vitro. (C) 2012 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
引用
收藏
页码:2218 / 2224
页数:7
相关论文
共 54 条
[21]   Dynamin-like MxA GTPase: Structural Insights into Oligomerization and Implications for Antiviral Activity [J].
Haller, Otto ;
Gao, Song ;
von der Malsburg, Alexander ;
Daumke, Oliver ;
Kochs, Georg .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2010, 285 (37) :28419-28424
[22]   Functional study on GTP hydrolysis by the GTP-binding protein from Sulfolobus solfataricus, a member of the HflX family [J].
Huang, Bo ;
Wu, Hao ;
Hao, Ning ;
Blombach, Fabian ;
van der Oost, John ;
Li, Xuemei ;
Zhang, Xuejun C. ;
Rao, Zihe .
JOURNAL OF BIOCHEMISTRY, 2010, 148 (01) :103-113
[23]   An essential GTPase, Der, containing double GTP-binding domains from Escherichia coli and Thermotoga maritima [J].
Hwang, J ;
Inouye, M .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (33) :31415-31421
[24]   Nuclear/Nucleolar GTPase 2 Proteins as a Subfamily of YlqF/YawG GTPases Function in Pre-60S Ribosomal Subunit Maturation of Mono- and Dicotyledonous Plants [J].
Im, Chak Han ;
Hwang, Sung Min ;
Son, Young Sim ;
Heo, Jae Bok ;
Bang, Woo Young ;
Suwastika, I. Nengah ;
Shiina, Takashi ;
Bahk, Jeong Dong .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2011, 286 (10) :8620-8632
[25]   E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides [J].
Jain, Nikhil ;
Dhimole, Neha ;
Khan, Abu Rafay ;
De, Debojyoti ;
Tomar, Sushil Kumar ;
Sajish, Mathew ;
Dutta, Dipak ;
Parrack, Pradeep ;
Prakash, Balaji .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2009, 379 (02) :201-205
[26]   CHARACTERIZATION OF THE FERROUS IRON UPTAKE SYSTEM OF ESCHERICHIA-COLI [J].
KAMMLER, M ;
SCHON, C ;
HANTKE, K .
JOURNAL OF BACTERIOLOGY, 1993, 175 (19) :6212-6219
[27]   The GAP arginine finger movement into the catalytic site of Ras increases the activation entropy [J].
Koetting, Carsten ;
Kallenbach, Angela ;
Suveyzclis, Yan ;
Wittinghofer, Alfred ;
Gerwert, Klaus .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (17) :6260-6265
[28]   NOA1 is an essential GTPase required for mitochondrial protein synthesis [J].
Kolanczyk, Mateusz ;
Pech, Markus ;
Zemojtel, Tomasz ;
Yamamoto, Hiroshi ;
Mikula, Ivan ;
Calvaruso, Maria-Antonietta ;
van den Brand, Mariel ;
Richter, Ricarda ;
Fischer, Bjoern ;
Ritz, Anita ;
Kossler, Nadine ;
Thurisch, Boris ;
Spoerle, Ralf ;
Smeitink, Jan ;
Kornak, Uwe ;
Chan, Danny ;
Vingron, Martin ;
Martasek, Pavel ;
Lightowlers, Robert N. ;
Nijtmans, Leo ;
Schuelke, Markus ;
Nierhaus, Knud H. ;
Mundlos, Stefan .
MOLECULAR BIOLOGY OF THE CELL, 2011, 22 (01) :1-11
[29]   Human OLA1 defines an ATPase subfamily in the Obg family of GTP-binding proteins [J].
Koller-Eichhorn, Roland ;
Marquardt, Tobias ;
Gail, Robert ;
Wittinghofer, Alfred ;
Kostrewa, Dirk ;
Kutay, Ulrike ;
Kambach, Christian .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (27) :19928-19937
[30]   Classification and evolution of P-loop GTPases and related ATPases [J].
Leipe, DD ;
Wolf, YI ;
Koonin, EV ;
Aravind, L .
JOURNAL OF MOLECULAR BIOLOGY, 2002, 317 (01) :41-72