Better structures from better data through better methods:: a review of developments in de novo macromolecular phasing techniques and associated instrumentation at LURE

被引:16
作者
Fourme, R
Shepard, W
Schiltz, M
Prangé, T
Ramin, M
Kahn, R
de la Fortelle, E
Bricogne, G
机构
[1] Univ Paris Sud, LURE, CNRS, CEA,MENRT, F-91898 Orsay, France
[2] CNRS, URA 1430, F-93017 Bobigny, France
[3] Univ Evry, F-91025 Evry, France
[4] CEA, CNRS, IBS, F-38027 Grenoble, France
[5] MRC, Mol Biol Lab, Cambridge CB2 2QH, England
来源
JOURNAL OF SYNCHROTRON RADIATION | 1999年 / 6卷
关键词
protein crystallography; MAD; MASC; xenon; X-ray detectors; maximum-likelihood refinement;
D O I
10.1107/S0909049599006688
中图分类号
TH7 [仪器、仪表];
学科分类号
0804 ; 080401 ; 081102 ;
摘要
This paper presents a survey of developments in de novo phasing methods and instrumentation in protein crystallography that have been carried out over the past 20 years at the French synchrotron radiation facility LURE. This includes progress in detector technology, particularly with multiwire proportional chambers, contributions to the development of the MAD and MASC methods for experimental phase-determination via anomalous dispersion, the exploration of the use of xenon and krypton as heavy atoms and anomalous scatterers, as well as the substantialization of parts of the 'Bayesian programme' for structure determination in highly efficient and user-friendly software. It is shown how the conjunction of high-quality data collection with novel phasing methods and with optimized data-processing schemes can bring about major improvements, even when the signal is very weak, in the accuracy of structural determinations.
引用
收藏
页码:834 / 844
页数:11
相关论文
共 87 条
[81]   MACROMOLECULAR CRYSTALLOGRAPHY WITH SYNCHROTRON RADIATION - COLLECTION AND PROCESSING OF DATA FROM CRYSTALS WITH A VERY LARGE UNIT-CELL [J].
USHA, R ;
JOHNSON, JE ;
MORAS, D ;
THIERRY, JC ;
FOURME, R ;
KAHN, R .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1984, 17 (JUN) :147-153
[82]   USING XENON AS A HEAVY-ATOM FOR DETERMINING PHASES IN SPERM WHALE METMYOGLOBIN [J].
VITALI, J ;
ROBBINS, AH ;
ALMO, SC ;
TILTON, RF .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1991, 24 (pt 5) :931-935
[83]   STRUCTURE OF THE CALCIUM-DEPENDENT LECTIN DOMAIN FROM A RAT MANNOSE-BINDING PROTEIN DETERMINED BY MAD PHASING [J].
WEIS, WI ;
KAHN, R ;
FOURME, R ;
DRICKAMER, K ;
HENDRICKSON, WA .
SCIENCE, 1991, 254 (5038) :1608-1615
[84]   Structure of the CheY-binding domain of histidine kinase CheA in complex with CheY [J].
Welch, M ;
Chinardet, N ;
Mourey, L ;
Birck, C ;
Samama, JP .
NATURE STRUCTURAL BIOLOGY, 1998, 5 (01) :25-29
[85]   Crystal structure of the anti-fungal target N-myristoyl transferase [J].
Weston, SA ;
Camble, R ;
Colls, J ;
Rosenbrock, G ;
Taylor, I ;
Egerton, M ;
Tucker, AD ;
Tunnicliffe, A ;
Mistry, A ;
Mancia, F ;
de la Fortelle, E ;
Irwin, J ;
Bricogne, G ;
Pauptit, RA .
NATURE STRUCTURAL BIOLOGY, 1998, 5 (03) :213-221
[86]   MACROMOLECULAR CRYSTALLOGRAPHY WITH SYNCHROTRON RADIATION .2. RESULTS [J].
WILSON, KS ;
STURA, EA ;
WILD, DL ;
TODD, RJ ;
STUART, DI ;
BABU, YS ;
JENKINS, JA ;
STANDING, TS ;
JOHNSON, LN ;
FOURME, R ;
KAHN, R ;
GADET, A ;
BARTELS, KS ;
BARTUNIK, HD .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1983, 16 (FEB) :28-41
[87]   ELECTRONIC STATIONARY PICTURE METHOD FOR HIGH-SPEED MEASUREMENT OF REFLECTION INTENSITIES FROM CRYSTALS WITH LARGE UNIT CELLS [J].
XUONG, NH ;
FREER, ST ;
HAMLIN, R ;
NIELSEN, C ;
VERNON, W .
ACTA CRYSTALLOGRAPHICA SECTION A, 1978, 34 (MAR) :289-296