Packing interactions in the apomyglobin folding intermediate

被引:178
作者
Kay, MS [1 ]
Baldwin, RL [1 ]
机构
[1] STANFORD UNIV,MED CTR,DEPT BIOCHEM,STANFORD,CA 94305
来源
NATURE STRUCTURAL BIOLOGY | 1996年 / 3卷 / 05期
关键词
D O I
10.1038/nsb0596-439
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The contribution of specific packing to the stability of the sperm whale apomyoglobin intermediate has been studied by urea denaturation monitored by circular dichroism and fluorescence. Mutations disrupting native packing sites within the subdomain formed by the A, G and H helices destabilize the intermediate, in contrast to the conclusion drawn from earlier studies of pH-induced unfolding. Based on these results, the intermediate is proposed to be stabilized by both partially formed native-like tertiary, and non-specific hydrophobic interactions forming a subdomain folding intermediate. The results help to explain how the intermediate acquires its structure and stability.
引用
收藏
页码:439 / 445
页数:7
相关论文
共 38 条
[31]   UNFOLDING FREE-ENERGY CHANGES DETERMINED BY THE LINEAR EXTRAPOLATION METHOD .1. UNFOLDING OF PHENYLMETHANESULFONYL ALPHA-CHYMOTRYPSIN USING DIFFERENT DENATURANTS [J].
SANTORO, MM ;
BOLEN, DW .
BIOCHEMISTRY, 1988, 27 (21) :8063-8068
[32]   PEPTIDE MODELS OF PROTEIN-FOLDING INITIATION SITES .3. THE G-H HELICAL HAIRPIN OF MYOGLOBIN [J].
SHIN, HC ;
MERUTKA, G ;
WALTHO, JP ;
TENNANT, LL ;
DYSON, HJ ;
WRIGHT, PE .
BIOCHEMISTRY, 1993, 32 (25) :6356-6364
[33]   HIGH-LEVEL EXPRESSION OF SPERM WHALE MYOGLOBIN IN ESCHERICHIA-COLI [J].
SPRINGER, BA ;
SLIGAR, SG .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1987, 84 (24) :8961-8965
[34]   STRUCTURE OF MYOGLOBIN REFINED AT 2.0 A RESOLUTION .1. CRYSTALLOGRAPHIC REFINEMENT OF METMYOGLOBIN FROM SPERM WHALE [J].
TAKANO, T .
JOURNAL OF MOLECULAR BIOLOGY, 1977, 110 (03) :537-568
[35]   MOLECULAR-DYNAMICS SIMULATIONS OF THE UNFOLDING OF APOMYOGLOBIN IN WATER [J].
TIRADORIVES, J ;
JORGENSEN, WL .
BIOCHEMISTRY, 1993, 32 (16) :4175-4184
[36]   PEPTIDE MODELS OF PROTEIN-FOLDING INITIATION SITES .1. SECONDARY STRUCTURE FORMATION BY PEPTIDES CORRESPONDING TO THE G-HELICE AND H-HELICE OF MYOGLOBIN [J].
WALTHO, JP ;
FEHER, VA ;
MERUTKA, G ;
DYSON, HJ ;
WRIGHT, PE .
BIOCHEMISTRY, 1993, 32 (25) :6337-6347
[37]   HYDROPHOBIC INTERACTION BETWEEN GLOBIN HELICES [J].
WEAVER, DL .
BIOPOLYMERS, 1992, 32 (05) :477-490
[38]   BIPARTITE STRUCTURE OF THE ALPHA-LACTALBUMIN MOLTEN GLOBULE [J].
WU, LC ;
PENG, ZY ;
KIM, PS .
NATURE STRUCTURAL BIOLOGY, 1995, 2 (04) :281-286