The Units Ontology: a tool for integrating units of measurement in science

被引:74
作者
Gkoutos, Georgios V. [1 ,2 ]
Schofield, Paul N. [3 ,4 ]
Hoehndorf, Robert [1 ,2 ]
机构
[1] Aberystwyth Univ, Dept Comp Sci, Old Coll, Aberystwyth SY23 2AX, Dyfed, Wales
[2] Univ Cambridge, Dept Genet, Cambridge CB2 3EH, England
[3] Univ Cambridge, Dept Physiol Dev & Neurosci, Cambridge CB2 3EG, England
[4] Jackson Lab, Bar Harbor, ME 04609 USA
来源
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION | 2012年
基金
美国国家卫生研究院;
关键词
INFORMATION; KNOWLEDGE; MODELS; OWL;
D O I
10.1093/database/bas033
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Units are basic scientific tools that render meaning to numerical data. Their standardization and formalization caters for the report, exchange, process, reproducibility and integration of quantitative measurements. Ontologies are means that facilitate the integration of data and knowledge allowing interoperability and semantic information processing between diverse biomedical resources and domains. Here, we present the Units Ontology (UO), an ontology currently being used in many scientific resources for the standardized description of units of measurements.
引用
收藏
页数:7
相关论文
共 50 条
[1]  
[Anonymous], P NATL ACAD SCI US
[2]  
[Anonymous], 2010, BRITANNICA GUIDE NUM
[3]  
[Anonymous], TECHNICAL REPORT
[4]   Gene Ontology: tool for the unification of biology [J].
Ashburner, M ;
Ball, CA ;
Blake, JA ;
Botstein, D ;
Butler, H ;
Cherry, JM ;
Davis, AP ;
Dolinski, K ;
Dwight, SS ;
Eppig, JT ;
Harris, MA ;
Hill, DP ;
Issel-Tarver, L ;
Kasarskis, A ;
Lewis, S ;
Matese, JC ;
Richardson, JE ;
Ringwald, M ;
Rubin, GM ;
Sherlock, G .
NATURE GENETICS, 2000, 25 (01) :25-29
[5]   Phenex: Ontological Annotation of Phenotypic Diversity [J].
Balhoff, James P. ;
Dahdul, Wasila M. ;
Kothari, Cartik R. ;
Lapp, Hilmar ;
Lundberg, John G. ;
Mabee, Paula ;
Midford, Peter E. ;
Westerfield, Monte ;
Vision, Todd J. .
PLOS ONE, 2010, 5 (05)
[6]  
Barbrow L. E., 1976, WEIGHTS MEASURES STA
[7]   Modeling biomedical experimental processes with OBI [J].
Brinkman R.R. ;
Courtot M. ;
Derom D. ;
Fostel J.M. ;
He Y. ;
Lord P. ;
Malone J. ;
Parkinson H. ;
Peters B. ;
Rocca-Serra P. ;
Ruttenberg A. ;
Sansone S.-A. ;
Soldatova L.N. ;
Stoeckert C.J., Jr. ;
Turner J.A. ;
Zheng J. ;
Grethe J. ;
Rubin D. ;
Bug B. ;
Wiemann S. ;
Hernandez-Boussard T. ;
Scheuermann R. ;
Bruskiewich R. ;
Gibson F. ;
Morrison N. ;
Field D. ;
Gray T. ;
Deutsch E. ;
Schober D. ;
Montecchi L. ;
Taylor C. ;
Whetzel T. ;
Westbrook J. ;
Fragoso G. ;
White J. ;
Heiskanen M. ;
Fan L. ;
Causton H. ;
Lister A. ;
Clancy K. ;
Cocos C. ;
Greenbaum J. ;
Grenon P. ;
Mungall C. ;
Pocock M. ;
Stenzhorn H. ;
Hunter L. ;
Mc Gee M. ;
Smith B. ;
Stevens R. .
Journal of Biomedical Semantics, 1 (Suppl 1)
[8]   Chemical Entity Semantic Specification: Knowledge representation for efficient semantic cheminformatics and facile data integration [J].
Chepelev, Leonid L. ;
Dumontier, Michel .
JOURNAL OF CHEMINFORMATICS, 2011, 3
[9]  
Collins JB, 2009, LECT NOTES COMPUT SC, V5625, P247, DOI 10.1007/978-3-642-02614-0_22
[10]   The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries [J].
Côté, RG ;
Jones, P ;
Apweiler, R ;
Hermjakob, H .
BMC BIOINFORMATICS, 2006, 7 (1)