Recent structural insights into the expanding world of carbohydrate-active enzymes

被引:225
作者
Davies, GJ [1 ]
Gloster, TM
Henrissat, B
机构
[1] York Univ, Dept Chem, Struct Biol Lab, York YO10 5YW, N Yorkshire, England
[2] Univ Aix Marseille 1, CNRS, UMR6098, F-13288 Marseille 9, France
[3] Univ Aix Marseille 2, CNRS, UMR6098, F-13288 Marseille 9, France
基金
英国生物技术与生命科学研究理事会;
关键词
D O I
10.1016/j.sbi.2005.10.008
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Enzymes that catalyse the synthesis and breakdown of glycosidic bonds account for 1-3% of the proteins encoded by the genomes of most organisms. At the current rate, over 12 000 glycosyltransferase and glycoside hydrolase open reading frames will appear during 2006. Recent advances in the study of the structure and mechanism of these carbohydrate-active enzymes reveal that glycoside hydrolases continue to display a wide variety of scaffolds, whereas nucleotide-sugar-dependent glycosyltransferases tend to be grafted onto just two protein folds. The past two years have seen significant advances, including the discovery of a novel NAD(+)-dependent glycosidase mechanism, the dissection of the reaction coordinate of sialidases and a better understanding of the expanding roles of auxiliary carbohydrate-binding domains.
引用
收藏
页码:637 / 645
页数:9
相关论文
共 59 条
[1]   The three-dimensional structure of invertase (β-fructosidase) from Thermotoga maritima reveals a bimodular arrangement and an evolutionary relationship between retaining and inverting glycosidases [J].
Alberto, F ;
Bignon, C ;
Sulzenbacher, G ;
Henrissat, B ;
Czjzek, M .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (18) :18903-18910
[2]   Parallel substrate binding sites in a β-agarase suggest a novel mode of action on double-helical agarose [J].
Allouch, J ;
Helbert, W ;
Henrissat, B ;
Czjzek, M .
STRUCTURE, 2004, 12 (04) :623-632
[3]   Structural insights into the catalytic mechanism of Trypanosoma cruzi trans-sialidase [J].
Amaya, MF ;
Watts, AG ;
Damager, I ;
Wehenkel, A ;
Nguyen, T ;
Buschiazzo, A ;
Paris, G ;
Frasch, AC ;
Withers, SG ;
Alzari, PM .
STRUCTURE, 2004, 12 (05) :775-784
[4]  
BLAIR DE, 2005, IN PRESS P NATL ACAD
[5]   Carbohydrate-binding modules: fine-tuning polysaccharide recognition [J].
Boraston, AB ;
Bolam, DN ;
Gilbert, HJ ;
Davies, GJ .
BIOCHEMICAL JOURNAL, 2004, 382 (03) :769-781
[6]   Activation of crystalline cellulose surfaces through the chemoenzymatic modification of xyloglucan [J].
Brumer, H ;
Zhou, Q ;
Baumann, MJ ;
Carlsson, K ;
Teeri, TT .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (18) :5715-5721
[7]   Crystal structure of glycogen synthase: homologous enzymes catalyze glycogen synthesis and degradation [J].
Buschiazzo, A ;
Ugalde, JE ;
Guerin, ME ;
Shepard, W ;
Ugalde, RA ;
Alzari, PM .
EMBO JOURNAL, 2004, 23 (16) :3196-3205
[8]   The crystal structure and mode of action of trans-sialidase, a key enzyme in Trypanosoma cruzi pathogenesis [J].
Buschiazzo, A ;
Amaya, MF ;
Cremona, ML ;
Frasch, AC ;
Alzari, PM .
MOLECULAR CELL, 2002, 10 (04) :757-768
[9]   Structure of the nucleotide-diphospho-sugar transferase, SpsA from Bacillus subtilis, in native and nucleotide-complexed forms [J].
Charnock, SJ ;
Davies, GJ .
BIOCHEMISTRY, 1999, 38 (20) :6380-6385
[10]   Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analog [J].
Chiu, CPC ;
Watts, AG ;
Lairson, LL ;
Gilbert, M ;
Lim, D ;
Wakarchuk, WW ;
Withers, SG ;
Strynadka, NCJ .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2004, 11 (02) :163-170