The Exciton model and the circular dichroism of polypeptides

被引:45
作者
Woody, RW [1 ]
机构
[1] Colorado State Univ, Dept Biochem & Mol Biol, Ft Collins, CO 80525 USA
来源
MONATSHEFTE FUR CHEMIE | 2005年 / 136卷 / 03期
关键词
circular dichroism; helical structures; peptides; excitons; transition moments;
D O I
10.1007/s00706-004-0279-2
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Exciton coupling of the 190 nm pi pi(*) transition is an important factor in the CD spectrum of peptides and proteins. The CD spectrum of the alpha-helix is dominated by the exciton effect. The spectrum is sensitive to the direction of the pi pi(*) transition dipole moment, especially for short helices. Exciton theory is much less successful in accounting for the CD spectrum of the poly(proline)II (PPII) conformation, an important conformer in collagen and in unordered peptides. Mixing of the pi pi(*) transition with high-energy transitions in the peptide backbone and in side chains must be considered to explain the strong negative CD band near 200 nm of PPII.
引用
收藏
页码:347 / 366
页数:20
相关论文
共 58 条
[1]   LEFT-HANDED POLYPROLINE-II HELICES COMMONLY OCCUR IN GLOBULAR-PROTEINS [J].
ADZHUBEI, AA ;
STERNBERG, MJE .
JOURNAL OF MOLECULAR BIOLOGY, 1993, 229 (02) :472-493
[2]   3RD TYPE OF SECONDARY STRUCTURE - NONCOOPERATIVE MOBILE CONFORMATION - PROTEIN DATA-BANK ANALYSIS [J].
ADZHUBEI, AA ;
EISENMENGER, F ;
TUMANYAN, VG ;
ZINKE, M ;
BRODZINSKI, S ;
ESIPOVA, NG .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1987, 146 (03) :934-938
[3]   MICROSCOPIC DESCRIPTION OF OPTICAL ROTATION [J].
ANDO, T .
PROGRESS OF THEORETICAL PHYSICS, 1968, 40 (03) :471-&
[4]  
[Anonymous], 1992, Adv. Biophys. Chem
[6]   ATOM DIPOLE INTERACTION MODEL FOR MOLECULAR POLARIZABILITY - APPLICATION TO POLYATOMIC-MOLECULES AND DETERMINATION OF ATOM POLARIZABILITIES [J].
APPLEQUIST, J ;
CARL, JR ;
FUNG, KK .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1972, 94 (09) :2952-+
[7]   ROTATORY PROPERTIES OF MOLECULES CONTAINING 2 PEPTIDE GROUPS - THEORY [J].
BAYLEY, PM ;
NIELSEN, EB ;
SCHELLMA.JA .
JOURNAL OF PHYSICAL CHEMISTRY, 1969, 73 (01) :228-&
[8]   OPTICAL-ACTIVITY OF HEMOPROTEINS IN THE SORET REGION - CIRCULAR-DICHROISM OF THE HEME UNDECAPEPTIDE OF CYTOCHROME-C IN AQUEOUS-SOLUTION [J].
BLAUER, G ;
SREERAMA, N ;
WOODY, RW .
BIOCHEMISTRY, 1993, 32 (26) :6674-6679
[9]   Improved theoretical pi-pi* absorption and circular dichroic spectra of helical polypeptides using new polarizabilities of atoms and NC'O chromophores [J].
Bode, KA ;
Applequist, J .
JOURNAL OF PHYSICAL CHEMISTRY, 1996, 100 (45) :17825-17834
[10]  
Bohm D., 1951, QUANTUM THEORY, P427