The Exciton model and the circular dichroism of polypeptides

被引:45
作者
Woody, RW [1 ]
机构
[1] Colorado State Univ, Dept Biochem & Mol Biol, Ft Collins, CO 80525 USA
来源
MONATSHEFTE FUR CHEMIE | 2005年 / 136卷 / 03期
关键词
circular dichroism; helical structures; peptides; excitons; transition moments;
D O I
10.1007/s00706-004-0279-2
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Exciton coupling of the 190 nm pi pi(*) transition is an important factor in the CD spectrum of peptides and proteins. The CD spectrum of the alpha-helix is dominated by the exciton effect. The spectrum is sensitive to the direction of the pi pi(*) transition dipole moment, especially for short helices. Exciton theory is much less successful in accounting for the CD spectrum of the poly(proline)II (PPII) conformation, an important conformer in collagen and in unordered peptides. Mixing of the pi pi(*) transition with high-energy transitions in the peptide backbone and in side chains must be considered to explain the strong negative CD band near 200 nm of PPII.
引用
收藏
页码:347 / 366
页数:20
相关论文
共 58 条
[51]   EXTENDING CD SPECTRA OF PROTEINS TO 168 NM IMPROVES THE ANALYSIS FOR SECONDARY STRUCTURES [J].
TOUMADJE, A ;
ALCORN, SW ;
JOHNSON, WC .
ANALYTICAL BIOCHEMISTRY, 1992, 200 (02) :321-331
[52]   THEORETICAL OPTICAL PROPERTIES OF POLY-L-PROLINE [J].
TTERLIKKIS, L ;
LOXSOM, FM ;
RHODES, W .
BIOPOLYMERS, 1973, 12 (03) :675-684
[53]   Comment on "Improving protein circular dichroism calculations in the far-ultraviolet through reparametrizing the amide chromophore" [J. Chem. Phys. 109, 782, (1998)] [J].
Woody, RW ;
Sreerama, N .
JOURNAL OF CHEMICAL PHYSICS, 1999, 111 (06) :2844-2845
[54]   THE CIRCULAR-DICHROISM OF ORIENTED BETA SHEETS - THEORETICAL PREDICTIONS [J].
WOODY, RW .
TETRAHEDRON-ASYMMETRY, 1993, 4 (03) :529-544
[55]   Transition moment directions in amide crystals [J].
Woody, RW ;
Raabe, G ;
Fleischhauer, J .
JOURNAL OF PHYSICAL CHEMISTRY B, 1999, 103 (42) :8984-8991
[56]   OPTICAL ROTATION OF ORIENTED HELICES .3. CALCULATION OF ROTATORY DISPERSION AND CIRCULAR DICHROISM OF ALPHA- AND 310-HELIX [J].
WOODY, RW ;
TINOCO, I .
JOURNAL OF CHEMICAL PHYSICS, 1967, 46 (12) :4927-&
[57]  
ZUBKOV VA, 1970, MOL BIOL, V4, P483
[58]  
[No title captured]