Hypermutation in shark immunoglobulin light chain genes results in contiguous substitutions

被引:84
作者
Lee, SS
Tranchina, D
Ohta, Y
Flajnik, MF
Hsu, E [1 ]
机构
[1] SUNY Hlth Sci Ctr, Dept Physiol & Pharmacol, Brooklyn, NY 11203 USA
[2] NYU, Courant Inst Math Sci, New York, NY 10003 USA
[3] NYU, Dept Biol, New York, NY 10003 USA
[4] Univ Maryland, Dept Microbiol & Immunol, Baltimore, MD 21201 USA
基金
美国国家科学基金会;
关键词
D O I
10.1016/S1074-7613(02)00300-X
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Among 631 substitutions present in 90 nurse shark immunoglobulin light chain somatic mutants, 338 constitute 2-4 bp stretches of adjacent changes. An absence of mutations in perinatal sequences and the bias for one mutating V gene in adults suggest that the diversification is antigen dependent. The substitutions shared no patterns, and the absence of donor sequences, including from family members, supports the idea that most changes arose from nontemplated mutation. The tandem mutations as a group are distinguished by consistently fewer transition changes and an A bias. We suggest this is one of several pathways of hypermutation diversifying shark antigen-receptor genes-point mutations, tandem mutations, and mutations with a G-C preference-that coevolved with or preceded gene rearrangement.
引用
收藏
页码:571 / 582
页数:12
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