The effect of noncollinearity of 15N-1H dipolar and 15N CSA tensors and rotational anisotropy on 15N relaxation, CSA/dipolar cross correlation, and TROSY

被引:57
作者
Fushman, D [1 ]
Cowburn, D [1 ]
机构
[1] Rockefeller Univ, New York, NY 10021 USA
基金
美国国家卫生研究院;
关键词
anisotropic overall motion; chemical shift anisotropy; NMR relaxation; TROSY;
D O I
10.1023/A:1008349331773
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Current approaches to N-15 relaxation in proteins assume that the N-15-H-1 dipolar and N-15 CSA tensors are collinear. We show theoretically that, when there is significant anisotropy of molecular rotation, different orientations of the two tensors, experimentally observed in proteins, nucleic acids, and small peptides, will result in differences in site-specific correlation functions and spectral densities. The standard treatments of the rates of longitudinal and transverse relaxation of amide N-15 nuclei, of the N-15 CSA/N-15-H-1 dipolar cross correlation, and of the TROSY experiment ape extended to account for the effect of noncollinearity of the N-15-H-1 dipolar and N-15 CSA (chemical shift anisotropy) tensors, This effect, proportional to the degree of anisotropy of the overall motion, (D-///D-perpendicular to - 1), is sensitive to the relative orientation of the two tensors and to the orientation of the peptide plane with respect to the diffusion coordinate frame. The effect is negligible at small degrees of anisotropy, but is predicted to become significant for D-///D-perpendicular to > 1.5, and at high magnetic fields. The effect of noncollinearity of N-15 CSA and N-15-H-1 dipolar interaction is sensitive to both gross (hydrodynamic) properties and atomic-level details of protein structure, Incorporation of this effect into relaxation data analysis is likely to improve both precision and accuracy of the derived characteristics of protein dynamics, especially at high magnetic fields and for molecules with a high degree of anisotropy of the overall motion. The effect will also make TROY efficiency dependent on local orientation in moderately anisotropic systems.
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页码:139 / 147
页数:9
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