Biomarkers for in situ detection of anaerobic ammonium-oxidizing (anammox) bacteria

被引:310
作者
Schmid, MC
Maas, B
Dapena, A
de Pas-Schoonen, KV
de Vossenberg, JV
Kartal, B
van Niftrik, L
Schmidt, I
Cirpus, I
Kuenen, JG
Wagner, M
Damsté, JSS
Kuypers, M
Revsbech, NP
Mendez, R
Jetten, MSM
Strous, M
机构
[1] Radboud Univ Nijmegen, Dept Microbiol, Fac Sci, NL-6525 ED Nijmegen, Netherlands
[2] Delft Univ Technol, Kluyver Lab Biotechnol, Delft, Netherlands
[3] Netherlands Inst Sea Res, Den Burg, Texel, Netherlands
[4] Univ Santiago de Compostela, Dept Chem Engn, Santiago De Compostela, Spain
[5] Univ Vienna, Dept Microbial Ecol, Vienna, Austria
[6] Max Planck Inst Marine Microbiol, Bremen, Germany
[7] Univ Aarhus, Dept Microbial Ecol, Aarhus, Denmark
关键词
D O I
10.1128/AEM.71.4.1677-1684.2005
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
引用
收藏
页码:1677 / 1684
页数:8
相关论文
共 57 条
[1]   The oligonucleotide probe database [J].
Alm, EW ;
Oerther, DB ;
Larsen, N ;
Stahl, DA ;
Raskin, L .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1996, 62 (10) :3557-3559
[2]   PHYLOGENETIC IDENTIFICATION AND IN-SITU DETECTION OF INDIVIDUAL MICROBIAL-CELLS WITHOUT CULTIVATION [J].
AMANN, RI ;
LUDWIG, W ;
SCHLEIFER, KH .
MICROBIOLOGICAL REVIEWS, 1995, 59 (01) :143-169
[3]   COMBINATION OF 16S RIBOSOMAL-RNA-TARGETED OLIGONUCLEOTIDE PROBES WITH FLOW-CYTOMETRY FOR ANALYZING MIXED MICROBIAL-POPULATIONS [J].
AMANN, RI ;
BINDER, BJ ;
OLSON, RJ ;
CHISHOLM, SW ;
DEVEREUX, R ;
STAHL, DA .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1990, 56 (06) :1919-1925
[4]   Phylogeny - A non-hyperthermophilic ancestor for bacteria [J].
Brochier, C ;
Philippe, H .
NATURE, 2002, 417 (6886) :244-244
[5]   2 KINDS OF LITHOTROPHS MISSING IN NATURE [J].
BRODA, E .
ZEITSCHRIFT FUR ALLGEMEINE MIKROBIOLOGIE, 1977, 17 (06) :491-493
[6]   Depletion of pre-16S rRNA in starved Escherichia coli cells [J].
Cangelosi, GA ;
Brabant, WH .
JOURNAL OF BACTERIOLOGY, 1997, 179 (14) :4457-4463
[7]   The domain-specific probe EUB338 is insufficient for the detection of all Bacteria:: Development and evaluation of a more comprehensive probe set [J].
Daims, H ;
Brühl, A ;
Amann, R ;
Schleifer, KH ;
Wagner, M .
SYSTEMATIC AND APPLIED MICROBIOLOGY, 1999, 22 (03) :434-444
[8]   N2 production by the anammox reaction in the anoxic water column of Golfo Dulce, Costa Rica [J].
Dalsgaard, T ;
Canfield, DE ;
Petersen, J ;
Thamdrup, B ;
Acuña-González, J .
NATURE, 2003, 422 (6932) :606-608
[9]   The occurrence of hopanoids in planctomycetes:: implications for the sedimentary biomarker record [J].
Damsté, JSS ;
Rijpstra, WIC ;
Schouten, S ;
Fuerst, JA ;
Jetten, MSM ;
Strous, M .
ORGANIC GEOCHEMISTRY, 2004, 35 (05) :561-566
[10]   Linearly concatenated cyclobutane lipids form a dense bacterial membrane [J].
Damsté, JSS ;
Strous, M ;
Rijpstra, WIC ;
Hopmans, EC ;
Geenevasen, JAJ ;
van Duin, ACT ;
van Niftrik, LA ;
Jetten, MSM .
NATURE, 2002, 419 (6908) :708-712