Measurement of cross correlation between dipolar coupling and chemical shift anisotropy in the spin relaxation of 13C, 15N-Labeled proteins

被引:31
作者
Ghose, R
Huang, K
Prestegard, JH
机构
[1] Univ Georgia, Complex Carbohydrate Res Ctr, Athens, GA 30602 USA
[2] Yale Univ, Dept Chem, New Haven, CT 06520 USA
关键词
chemical shift anisotropy; dipolar coupling; interference effects; carbonyl relaxation; secondary structure;
D O I
10.1006/jmre.1998.1602
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We present a simple method for extracting interference effects between chemical shift anisotropy (CSA) and dipolar coupling from spin relaxation measurements in macromolecules, and we apply this method to extracting cross-correlation rates involving interference of amide N-15 CSA and N-15-H-1 dipolar coupling and interference of carbonyl C-13' CSA and N-15-C-13' dipolar coupling, in a small protein. A theoretical basis for the interpretation of these rates is presented, While it proves difficult to quantitatively separate the structural and dynamic contributions to these crosscorrelation rates in the presence of anisotropic overall tumbling and a nonaxially symmetric chemical shift tensor, some useful qualitative correlations of data with protein structure can be seen when simplifying assumptions are made. (C) 1998 Academic Press.
引用
收藏
页码:487 / 499
页数:13
相关论文
共 41 条
[1]   NMR relaxation mechanisms for backbone carbonyl carbons in a C-13, N-15-labeled protein [J].
Allard, P ;
Hard, T .
JOURNAL OF MAGNETIC RESONANCE, 1997, 126 (01) :48-57
[2]   INTERMOLECULAR HYDROGEN-BONDING EFFECT ON C-13 NMR CHEMICAL-SHIFTS OF GLYCINE RESIDUE CARBONYL CARBONS OF PEPTIDES IN THE SOLID-STATE [J].
ANDO, S ;
ANDO, I ;
SHOJI, A ;
OZAKI, T .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1988, 110 (11) :3380-3386
[3]   Metropolis Monte Carlo implementation of Bayesian time-domain parameter estimation: Application to coupling constant estimation from antiphase multiplets [J].
Andrec, M ;
Prestegard, JH .
JOURNAL OF MAGNETIC RESONANCE, 1998, 130 (02) :217-232
[4]   THE ACCORDION EXPERIMENT, A SIMPLE APPROACH TO 3-DIMENSIONAL NMR-SPECTROSCOPY [J].
BODENHAUSEN, G ;
ERNST, RR .
JOURNAL OF MAGNETIC RESONANCE, 1981, 45 (02) :367-373
[5]   DIRECT DETERMINATION OF RATE CONSTANTS OF SLOW DYNAMIC PROCESSES BY TWO-DIMENSIONAL ACCORDION SPECTROSCOPY IN NUCLEAR MAGNETIC-RESONANCE [J].
BODENHAUSEN, G ;
ERNST, RR .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1982, 104 (05) :1304-1309
[6]  
Boggs P T, 1992, USERS REFERENCE GUID
[7]   MEASUREMENT OF CROSS-CORRELATION OF FLUCTUATIONS OF DIPOLAR COUPLINGS AND ANISOTROPIC CHEMICAL-SHIFTS BY SELECTIVE SPIN LOCKING [J].
BURGHARDT, I ;
KONRAT, R ;
BODENHAUSEN, G .
MOLECULAR PHYSICS, 1992, 75 (02) :467-486
[8]   A MAGIC-ANGLE SAMPLE-SPINNING NUCLEAR-MAGNETIC-RESONANCE SPECTROSCOPIC STUDY OF INTERFERENCE EFFECTS IN THE NUCLEAR-SPIN RELAXATION OF POLYMERS [J].
CHUNG, J ;
OLDFIELD, E ;
THEVAND, A ;
WERBELOW, L .
JOURNAL OF MAGNETIC RESONANCE, 1992, 100 (01) :69-81
[9]  
Cordier F, 1996, J BIOMOL NMR, V7, P163, DOI 10.1007/BF00203827
[10]   Motional model analyses of protein and peptide dynamics using C-13 and N-15 NMR relaxation [J].
Daragan, VA ;
Mayo, KH .
PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY, 1997, 31 :63-105