Assays for the rapid and specific identification of North American Yersinia pestis and the common laboratory strain CO92

被引：13

作者：

Vogler, Amy J. ^{[1
]}

Driebe, Elizabeth M. ^{[1
]}

Lee, Judy ^{[1
]}

Auerbach, Raymond K. ^{[1
]}

Allender, Christopher J. ^{[1
]}

Stanley, Miles ^{[1
]}

Kubota, Kristy ^{[2
]}

Andersen, Gary L. ^{[3
]}

Radnedge, Lyndsay ^{[4
]}

Worsham, Patricia L. ^{[5
]}

Keim, Paul ^{[1
]}

Wagner, David M. ^{[1
]}

机构：

[1] No Arizona Univ, Dept Biol Sci, Flagstaff, AZ 86011 USA

[2] Ctr Dis Control & Prevent, Ft Collins, CO USA

[3] Lawrence Berkeley Natl Lab, Berkeley, CA USA

[4] Lawrence Livermore Natl Lab, Livermore, CA USA

[5] USA, Med Res Inst Infect Dis, Frederick, MD USA

来源：

BIOTECHNIQUES | 2008年 / 44卷 / 02期

关键词：

D O I：

10.2144/000112815

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

We present TaqMan-minor groove binding (MGB) assays for an SNP that separates the Yersinia pestis strain CO92 from all other strains and for another SNP that separates North American strains from all other global strains.

引用

页码：201 / +

页数：4

共 21 条

[1] Microevolution and history of the plague bacillus, Yersinia pestis [J].

Achtman, M ;

Morelli, G ;

Zhu, PX ;

Wirth, T ;

Diehl, I ;

Kusecek, B ;

Vogler, AJ ;

Wagner, DM ;

Allender, CJ ;

Easterday, WR ;

Chenal-Francisque, V ;

Worsham, P ;

Thomson, NR ;

Parkhill, J ;

Lindler, LE ;

Carniel, E ;

Keim, P .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (51) :17837-17842

[2] Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516:: Evidence of gene reduction in an emerging pathogen [J].

Chain, Patrick S. G. ;

Hu, Ping ;

Malfatti, Stephanie A. ;

Radnedge, Lyndsay ;

Larimer, Frank ;

Vergez, Lisa M. ;

Worsham, Patricia ;

Chu, May C. ;

Andersen, Gary L. .

JOURNAL OF BACTERIOLOGY, 2006, 188 (12) :4453-4463

[3] Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis [J].

Chain, PSG ;

Carniel, E ;

Larimer, FW ;

Lamerdin, J ;

Stoutland, PO ;

Regala, WM ;

Georgescu, AM ;

Vergez, LM ;

Land, ML ;

Motin, VL ;

Brubaker, RR ;

Fowler, J ;

Hinnebusch, J ;

Marceau, M ;

Medigue, C ;

Simonet, M ;

Chenal-Francisque, V ;

Souza, B ;

Dacheux, D ;

Elliott, JM ;

Derbise, A ;

Hauser, LJ ;

Garcia, E .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (38) :13826-13831

[4]

Davis KJ, 1996, ARCH PATHOL LAB MED, V120, P156

[5] Genome sequence of Yersinia pestis KIM [J].

Deng, W ;

Burland, V ;

Plunkett, G ;

Boutin, A ;

Mayhew, GF ;

Liss, P ;

Perna, NT ;

Rose, DJ ;

Mau, B ;

Zhou, SG ;

Schwartz, DC ;

Fetherston, JD ;

Lindler, LE ;

Brubaker, RR ;

Plano, GV ;

Straley, SC ;

McDonough, KA ;

Nilles, ML ;

Matson, JS ;

Blattner, FR ;

Perry, RD .

JOURNAL OF BACTERIOLOGY, 2002, 184 (16) :4601-4611

[6] CAT-TRANSMITTED FATAL PNEUMONIC PLAGUE IN A PERSON WHO TRAVELED FROM COLORADO TO ARIZONA [J].

DOLL, JM ;

ZEITZ, PS ;

ETTESTAD, P ;

BUCHOLTZ, AL ;

DAVIS, T ;

GAGE, K .

AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 1994, 51 (01) :109-114

[7] Specific detection of Bacillus anthracis using a TaqMan® mismatch amplification mutation assay [J].

Easterday, WR ;

Van Ert, MN ;

Zanecki, S ;

Keim, P .

BIOTECHNIQUES, 2005, 38 (05) :731-735

[8] Use of single nucleotide polymorphisms in the plcR gene for specific identification of Bacillus anthracis [J].

Easterday, WR ;

Van Ert, MN ;

Simonson, TS ;

Wagner, DM ;

Kenefic, LJ ;

Allender, CJ ;

Keim, P .

JOURNAL OF CLINICAL MICROBIOLOGY, 2005, 43 (04) :1995-1997

[9] Differential plague-transmission dynamics determine Yersinia pestis population genetic structure on local, regional, and global scales [J].

Girard, JM ;

Wagner, DM ;

Vogler, AJ ;

Keys, C ;

Allender, CJ ;

Drickamer, LC ;

Keim, P .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (22) :8408-8413

[10] Characterization of the variable-number tandem repeats in vrrA from different Bacillus anthracis isolates [J].

Jackson, PJ ;

Walthers, EA ;

Kalif, AS ;

Richmond, KL ;

Adair, DM ;

Hill, KK ;

Kuske, CR ;

Andersen, GL ;

Wilson, KH ;

HughJones, ME ;

Keim, P .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1997, 63 (04) :1400-1405

← 1 2 3 →