Noncovalent interactions: Defining cooperativity. Ligand binding aided by reduced dynamic behavior of receptors. Binding of bacterial cell wall analogues to ristocetin A

被引:27
作者
Williams, DH [1 ]
Davies, NL [1 ]
Zerella, R [1 ]
Bardsley, B [1 ]
机构
[1] Univ Cambridge, Dept Chem, Cambridge CB2 1EW, England
关键词
D O I
10.1021/ja039409p
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Changes in the relative populations of the monomer and asymmetric dimer forms of ristocetin A, upon binding of two molecules of ligand, suggest that ligand binding is negatively cooperative with respect to dimerization. However, strong hydrogen bonds formed in the binding sites of the ligands are reinforced in the dimer relative to the monomer, and the barrier to dissociation of the dimer is increased upon binding of the ligands. It is concluded that the interactions which are common in the binding of both ligands are made with positive cooperativity with respect to those involved in dimerization. The conclusions are relevant to the binding of ligands to proteins, where ligand binding energy can be derived from stabilization of the protein in its ligand-bound form.
引用
收藏
页码:2042 / 2049
页数:8
相关论文
共 32 条
[1]  
Benkoussa M, 1997, RECEPT SIGNAL TRANS, V7, P257
[2]   ASPARTATE RECEPTORS OF ESCHERICHIA-COLI AND SALMONELLA-TYPHIMURIUM BIND LIGAND WITH NEGATIVE AND HALF-OF-THE-SITES COOPERATIVITY [J].
BIEMANN, HP ;
KOSHLAND, DE .
BIOCHEMISTRY, 1994, 33 (03) :629-634
[3]   A SHORT LINEAR PEPTIDE THAT FOLDS INTO A NATIVE STABLE BETA-HAIRPIN IN AQUEOUS-SOLUTION [J].
BLANCO, FJ ;
RIVAS, G ;
SERRANO, L .
NATURE STRUCTURAL BIOLOGY, 1994, 1 (09) :584-590
[4]   An enthalpic component in cooperativity: The relationship between enthalpy, entropy, and noncovalent structure in weak associations [J].
Calderone, CT ;
Williams, DH .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2001, 123 (26) :6262-6267
[5]   Cooperativity and anti cooperativity between ligand binding and the dimerization of ristocetin A: Asymmetry of a homodimer complex and implications for signal transduction [J].
Cho, YR ;
Maguire, AJ ;
Try, AC ;
Westwell, MS ;
Groves, P ;
Williams, DH .
CHEMISTRY & BIOLOGY, 1996, 3 (03) :207-215
[6]   HYDROGEN-EXCHANGE MEASUREMENT OF THE FREE-ENERGY OF STRUCTURAL AND ALLOSTERIC CHANGE IN HEMOGLOBIN [J].
ENGLANDER, SW ;
ENGLANDER, JJ ;
MCKINNIE, RE ;
ACKERS, GK ;
TURNER, GJ ;
WESTRICK, JA ;
GILL, SJ .
SCIENCE, 1992, 256 (5064) :1684-1687
[7]   Tyrosine hydroxylase binds tetrahydrobiopterin cofactor with negative cooperativity, as shown by kinetic analyses and surface plasmon resonance detection [J].
Flatmark, T ;
Almås, B ;
Knappskog, PM ;
Berge, SV ;
Svebak, RM ;
Chehin, R ;
Muga, A ;
Martínez, A .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1999, 262 (03) :840-849
[8]   The propagation of binding interactions to remote sites in proteins: Analysis of the binding of the monoclonal antibody D1.3 to lysozyme [J].
Freire, E .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (18) :10118-10122
[9]   RECOGNITION OF THE CELL-WALL BINDING-SITE OF THE VANCOMYCIN-GROUP ANTIBIOTICS BY UNNATURAL STRUCTURAL MOTIFS - H-1-NMR STUDIES OF THE EFFECTS OF LIGAND-BINDING ON ANTIBIOTIC DIMERIZATION [J].
GROVES, P ;
SEARLE, MS ;
CHICARELLIROBINSON, I ;
WILLIAMS, DH .
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 1, 1994, (06) :659-665
[10]   ASYMMETRY IN THE STRUCTURE OF GLYCOPEPTIDE ANTIBIOTIC DIMERS - NMR-STUDIES OF THE RISTOCETIN-A COMPLEX WITH A BACTERIAL-CELL WALL ANALOG [J].
GROVES, P ;
SEARLE, MS ;
WALTHO, JP ;
WILLIAMS, DH .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (30) :7958-7964