Structural Basis for Gating and Activation of RyR1

被引:281
作者
des Georges, Amedee [1 ,2 ,7 ]
Clarke, Oliver B. [1 ]
Zalk, Ran [3 ,8 ]
Yuan, Qi [3 ]
Condon, Kendall J. [1 ,2 ]
Grassucci, Robert A. [1 ,2 ]
Hendrickson, Wayne A. [1 ,3 ]
Marks, Andrew R. [3 ,4 ,5 ]
Frank, Joachim [1 ,2 ,6 ]
机构
[1] Columbia Univ, Dept Biochem & Mol Biophys, 630 W 168th St, New York, NY 10032 USA
[2] Columbia Univ, Howard Hughes Med Inst, New York, NY 10032 USA
[3] Columbia Univ, Dept Physiol & Cellular Biophys, New York, NY 10027 USA
[4] Columbia Univ, Dept Med, New York, NY 10027 USA
[5] Columbia Univ, Coll Phys & Surg, Wu Ctr Mol Cardiol, New York, NY 10027 USA
[6] Columbia Univ, Dept Biol Sci, New York, NY 10027 USA
[7] CUNY, Adv Sci Res Ctr, 85 St Nicholas Terrace, New York, NY 10031 USA
[8] Ben Gurion Univ Negev, Natl Inst Biotechnol Negev, IL-84105 Beer Sheva, Israel
基金
美国国家卫生研究院;
关键词
CALCIUM-RELEASE CHANNEL; MUSCLE SARCOPLASMIC-RETICULUM; CARDIAC RYANODINE RECEPTOR; PARTICLE ELECTRON CRYOMICROSCOPY; MULTIPLE SEQUENCE ALIGNMENT; SKELETAL-MUSCLE; CRYO-EM; CRYSTAL-STRUCTURES; CA2+ ACTIVATION; S4-S5; LINKER;
D O I
10.1016/j.cell.2016.08.075
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The type-1 ryanodine receptor (RyR1) is an intracellular calcium(Ca2+) release channel required for skeletal muscle contraction. Here, we present cryo-EM reconstructions of RyR1 in multiple functional states revealing the structural basis of channel gating and ligand-dependent activation. Binding sites for the channel activators Ca2+, ATP, and caffeine were identified at interdomain interfaces of the C-terminal domain. Either ATP or Ca2+ alone induces conformational changes in the cytoplasmic assembly ("priming''), without pore dilation. In contrast, in the presence of all three activating ligands, high-resolution reconstructions of open and closed states of RyR1 were obtained from the same sample, enabling analyses of conformational changes associated with gating. Gating involves global conformational changes in the cytosolic assembly accompanied by local changes in the transmembrane domain, which include bending of the S6 transmembrane segment and consequent pore dilation, displacement, and deformation of the S4-S5 linker and conformational changes in the pseudo-voltage-sensor domain.
引用
收藏
页码:145 / +
页数:30
相关论文
共 69 条
[31]   MAMMALIAN SKELETAL-MUSCLE FIBERS DISTINGUISHED BY CONTENTS OF PHOSPHOCREATINE, ATP, AND PI [J].
KUSHMERICK, MJ ;
MOERLAND, TS ;
WISEMAN, RW .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (16) :7521-7525
[32]   Kv Channel Gating Requires a Compatible S4-S5 Linker and Bottom Part of S6, Constrained by Non-interacting Residues [J].
Labro, Alain J. ;
Raes, Adam L. ;
Grottesi, Alessandro ;
Van Hoorick, Diane ;
Sansom, Mark S. P. ;
Snyders, Dirk J. .
JOURNAL OF GENERAL PHYSIOLOGY, 2008, 132 (06) :667-680
[33]   DOCK 6: Combining techniques to model RNA-small molecule complexes [J].
Lang, P. Therese ;
Brozell, Scott R. ;
Mukherjee, Sudipto ;
Pettersen, Eric F. ;
Meng, Elaine C. ;
Thomas, Veena ;
Rizzo, Robert C. ;
Case, David A. ;
James, Thomas L. ;
Kuntz, Irwin D. .
RNA, 2009, 15 (06) :1219-1230
[34]   Crystal structures of wild type and disease mutant forms of the ryanodine receptor SPRY2 domain [J].
Lau, Kelvin ;
Van Petegem, Filip .
NATURE COMMUNICATIONS, 2014, 5
[35]  
Laver DR, 2001, J PHYSIOL-LONDON, V537, P763
[36]  
LEE HB, 1994, J BIOL CHEM, V269, P13305
[37]   Molecular basis of Ca2+ activation of the mouse cardiac Ca2+ release channel (ryanodine receptor) [J].
Li, P ;
Chen, SRW .
JOURNAL OF GENERAL PHYSIOLOGY, 2001, 118 (01) :33-44
[38]   Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM [J].
Li, Xueming ;
Mooney, Paul ;
Zheng, Shawn ;
Booth, Christopher R. ;
Braunfeld, Michael B. ;
Gubbens, Sander ;
Agard, David A. ;
Cheng, Yifan .
NATURE METHODS, 2013, 10 (06) :584-+
[39]   Coupled gating between individual skeletal muscle Ca2+ release channels (ryanodine receptors) [J].
Marx, SO ;
Ondrias, K ;
Marks, AR .
SCIENCE, 1998, 281 (5378) :818-821
[40]   Channel Gating Dependence on Pore Lining Helix Glycine Residues in Skeletal Muscle Ryanodine Receptor [J].
Mei, Yingwu ;
Xu, Le ;
Mowrey, David D. ;
Giraldez, Raul Mendez ;
Wang, Ying ;
Pasek, Daniel A. ;
Dokholyan, Nikolay V. ;
Meissner, Gerhard .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2015, 290 (28) :17535-17545