Genomewide Analysis of Divergence of Antibiotic Resistance Determinants in Closely Related Isolates of Acinetobacter baumannii

被引:93
作者
Adams, Mark D. [1 ,5 ]
Chan, E. Ricky [1 ]
Molyneaux, Neil D. [1 ]
Bonomo, Robert A. [2 ,3 ,4 ,5 ,6 ]
机构
[1] Case Western Reserve Univ, Dept Genet, Cleveland, OH 44106 USA
[2] Case Western Reserve Univ, Dept Med, Cleveland, OH 44106 USA
[3] Case Western Reserve Univ, Dept Pharmacol & Mol Biol, Cleveland, OH 44106 USA
[4] Case Western Reserve Univ, Dept Microbiol, Cleveland, OH 44106 USA
[5] Case Western Reserve Univ, Ctr Prote & Bioinformat, Cleveland, OH 44106 USA
[6] Vet Affairs Med Ctr, Louis Stokes Cleveland Dept, Cleveland, OH 44106 USA
关键词
INTENSIVE-CARE-UNIT; MULTIDRUG-RESISTANCE; BLA(OXA-58) GENE; MEDICAL-CENTER; EVOLUTION; SEQUENCE; STRAINS; PLASMID; ALGORITHMS; DIVERSITY;
D O I
10.1128/AAC.00057-10
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Multidrug resistance has emerged as a significant concern with infections caused by Acinetobacter baumannii. Ample evidence supports the involvement of mobile genetic elements in the transfer of antibiotic resistance genes, but the extent of variability and the rate of genetic change associated with the acquisition of antibiotic resistance have not been studied in detail. Whole-genome sequence analysis of six closely related clinical isolates of A. baumannii, including four from the same hospital, revealed extensive divergence of the resistance genotype that correlated with observed differences in antimicrobial susceptibility. Resistance genes associated with insertion sequences, plasmids, and a chromosomal resistance gene island all showed variability. The highly dynamic resistance gene repertoire suggests rapid evolution of drug resistance.
引用
收藏
页码:3569 / 3577
页数:9
相关论文
共 41 条
[1]   Medics braced for fresh superbug [J].
Abbott, A .
NATURE, 2005, 436 (7052) :758-758
[2]   Comparative Genome Sequence Analysis of Multidrug-Resistant Acinetobacter baumannii [J].
Adams, Mark D. ;
Goglin, Karrie ;
Molyneaux, Neil ;
Hujer, Kristine M. ;
Lavender, Heather ;
Jamison, Jennifer J. ;
MacDonald, Ian J. ;
Martin, Kristienna M. ;
Russo, Thomas ;
Campagnari, Anthony A. ;
Hujer, Andrea M. ;
Bonomo, Robert A. ;
Gill, Steven R. .
JOURNAL OF BACTERIOLOGY, 2008, 190 (24) :8053-8064
[3]   Genetic Basis of Multidrug Resistance in Acinetobacter baumannii Clinical Isolates at a Tertiary Medical Center in Pennsylvania [J].
Adams-Haduch, Jennifer M. ;
Paterson, David L. ;
Sidjabat, Hanna E. ;
Pasculle, Anthony W. ;
Potoski, Brian A. ;
Muto, Carlene A. ;
Harrison, Lee H. ;
Doi, Yohei .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2008, 52 (11) :3837-3843
[4]  
[Anonymous], 2005, PHYLIP (phylogeny inference package) version 3.6
[5]   Multicopy blaOXA-58 gene as a source of high-Level resistance to carbapenems in Acinetobacter baumannii [J].
Bertini, Alessia ;
Poirel, Laurent ;
Bernabeu, Sandrine ;
Fortini, Daniela ;
Villa, Laura ;
Nordmann, Patrice ;
Carattoli, Alessandra .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2007, 51 (07) :2324-2328
[6]   Multiple sequence alignment with the Clustal series of programs [J].
Chenna, R ;
Sugawara, H ;
Koike, T ;
Lopez, R ;
Gibson, TJ ;
Higgins, DG ;
Thompson, JD .
NUCLEIC ACIDS RESEARCH, 2003, 31 (13) :3497-3500
[7]   Fast algorithms for large-scale genome alignment and comparison [J].
Delcher, AL ;
Phillippy, A ;
Carlton, J ;
Salzberg, SL .
NUCLEIC ACIDS RESEARCH, 2002, 30 (11) :2478-2483
[8]   Modes and modulations of antibiotic resistance gene expression [J].
Depardieu, Florence ;
Podglajen, Isabelle ;
Leclercq, Roland ;
Collatz, Ekkehard ;
Courvalin, Patrice .
CLINICAL MICROBIOLOGY REVIEWS, 2007, 20 (01) :79-+
[9]   An increasing threat in hospitals:: multidrug-resistant Acinetobacter baumannii [J].
Dijkshoorn, Lenie ;
Nemec, Alexandr ;
Seifert, Harald .
NATURE REVIEWS MICROBIOLOGY, 2007, 5 (12) :939-951
[10]   Toward the Use of Genomics to Study Microevolutionary Change in Bacteria [J].
Falush, Daniel .
PLOS GENETICS, 2009, 5 (10)