Extensive HLA class I allele promiscuity among viral CTL epitopes

被引:104
作者
Frahm, Nicole
Yusim, Karina
Suscovich, Todd J.
Adams, Sharon
Sidney, John
Hraber, Peter
Hewitt, Hannah S.
Linde, Caitlyn H.
Kavanagh, Daniel G.
Woodberry, Tonia
Henry, Leah M.
Faircloth, Kellie
Listgarten, Jennifer
Kadie, Carl
Jojic, Nebojsa
Sango, Kaori
Brown, Nancy V.
Pae, Eunice
Zaman, M. Tauheed
Bihl, Florian
Khatri, Ashok
John, Mina
Mallal, Simon
Marincola, Francesco M.
Walker, Bruce D.
Sette, Alessandro
Heckerman, David
Korber, Bette T.
Brander, Christian
机构
[1] Harvard Univ, Massachusetts Gen Hosp, Sch Med, Partners AIDS Res Ctr, Charlestown, MA 02129 USA
[2] Los Alamos Natl Lab, Los Alamos, NM USA
[3] NIH, Ctr Clin, Bethesda, MD 20892 USA
[4] La Jolla Inst Allergy & Immunol, La Jolla, CA USA
[5] Microsoft Res, Redmond, WA USA
[6] Fenway Community Hlth Ctr, Boston, MA USA
[7] Lemuel Shattuck Hosp, Boston, MA USA
[8] Harvard Univ, Sch Med, Massachusetts Gen Hosp, Endocrine Unit, Boston, MA 02115 USA
[9] Royal Perth Hosp, Ctr Clin Immunol & Biomed Stat, Perth, WA, Australia
[10] Murdoch Univ, Perth, WA, Australia
[11] Harvard Univ, Sch Med, Massachusetts Gen Hosp, Howard Hughes Med Inst, Boston, MA 02115 USA
[12] Harvard Univ, Sch Med, Div AIDS, Boston, MA USA
[13] Santa Fe Inst, Santa Fe, NM 87501 USA
关键词
antigen; bioinformatics; CD8 T cells; HIV; immune responses;
D O I
10.1002/eji.200737365
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Promiscuous binding of T helper epitopes to MHC class 11 molecules has been well established, but few examples of promiscuous class I-restricted epitopes exist. To address the extent of promiscuity of HLA class I peptides, responses to 242 well-defined viral epitopes were tested in 100 subjects regardless of the individuals' HLA type. Surprisingly, half of all detected responses were seen in the absence of the originally reported restricting HLA class I allele, and only 3% of epitopes were recognized exclusively in the presence of their original allele. Functional assays confirmed the frequent recognition of HLA class I-restricted T cell epitopes on several alternative alleles across HLA class I supertypes and encoded on different class I loci. These data have significant implications for the understanding of MHC class I-restricted antigen presentation and vaccine development.
引用
收藏
页码:2419 / 2433
页数:15
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