XML, bioinformatics and data integration

被引：139

作者：

Achard, F

Vaysseix, G

Barillot, E

机构：

[1] CRI Infobiogen, F-91000 Evry, France

[2] Genethon, F-91000 Evry, France

来源：

BIOINFORMATICS | 2001年 / 17卷 / 02期

关键词：

D O I：

10.1093/bioinformatics/17.2.115

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

Motivation: The extensible Markup Language (XML) is an emerging standard for structuring documents, notably for the World Wide Web. In this paper, the authors present XML and examine its use as a data language for bioinformatics. In particular, XML is compared to other languages, and some of the potential uses of XML in bioinformatics applications are presented. The authors propose to adopt XML for data interchange between databases and other sources of data. Finally the discussion is illustrated by a test case of a pedigree data model in XML.

引用

页码：115 / 125

页数：11

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