Identification of transcripts and promoter regions of ovine adenovirus OAV287

被引:23
作者
Khatri, A [1 ]
Both, GW [1 ]
机构
[1] CSIRO, N Ryde, NSW 2113, Australia
关键词
D O I
10.1006/viro.1998.9136
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The ovine adenovirus isolate OAV287 represents a new group of adenoviruses that are distinct from the Mast-and Aviadenoviruses by several criteria, including genome arrangement. The OAV major late promoter and some late transcripts were previously mapped. To better define the probable coding sequences and to identify the approximate location of early promoters a partial transcription map of the genome was elucidated using a PCR-based approach. This was possible because the complete nucleotide sequence of the genome was known. The strategy permitted the identification of transcription start sites and RNA splice junctions and allowed the approximate location of promoters in the lefthand end, IVa(2),, E2, P32K, and E4 regions to be deduced. The data showed that lefthand end and E4 regions are controlled by three and two temporally distinct promoters, respectively. The E2 region is controlled by a single promoter, in contrast to Mastadenoviruses, where E2 expression is controlled by the E2A and E2B promoters. The p32kDa structural protein at the lefthand end and the IVa(2) protein are also expressed from their own promoters. These data contribute to the first overview of transcription from a non-Mastadenovirus genome. (C) 1998 Academic Press.
引用
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页码:128 / 141
页数:14
相关论文
共 30 条
[21]  
ROBERTS RJ, 1984, J BIOL CHEM, V259, P3968
[22]  
Sambrook J., 2002, MOL CLONING LAB MANU
[23]   REVOLUTIONS IN RAPID AMPLIFICATION OF CDNA ENDS - NEW STRATEGIES FOR POLYMERASE CHAIN-REACTION CLONING OF FULL-LENGTH CDNA ENDS [J].
SCHAEFER, BC .
ANALYTICAL BIOCHEMISTRY, 1995, 227 (02) :255-273
[24]  
Shenk T., 1996, Fields Virology, VThird, P2111
[25]   Ovine adenovirus (OAV287) lacks a virus-associated RNA gene [J].
Venktesh, A ;
Watt, F ;
Xu, ZZ ;
Both, GW .
JOURNAL OF GENERAL VIROLOGY, 1998, 79 :509-516
[26]   SEQUENCE OF OVINE ADENOVIRUS HOMOLOGS FOR 100K HEXON ASSEMBLY, 33K, PVIII, AND FIBER GENES - EARLY REGION E3 IS NOT IN THE EXPECTED LOCATION [J].
VRATI, S ;
BOYLE, D ;
KOCHERHANS, R ;
BOTH, GW .
VIROLOGY, 1995, 209 (02) :400-408
[27]   Nucleotide sequence of ovine adenovirus tripartite leader sequence and homologues of the IVa2, DNA polymerase and terminal proteins [J].
Vrati, S ;
Brookes, DE ;
Boyle, DB ;
Both, GW .
GENE, 1996, 177 (1-2) :35-41
[28]   Unique genome arrangement of an ovine adenovirus: Identification of new proteins and proteinase cleavage sites [J].
Vrati, S ;
Brookes, DE ;
Strike, P ;
Khatri, A ;
Boyle, DB ;
Both, GW .
VIROLOGY, 1996, 220 (01) :186-199
[29]   ACTIVATION OF ADENOVIRUS-CODED PROTEASE AND PROCESSING OF PRETERMINAL PROTEIN [J].
WEBSTER, A ;
LEITH, IR ;
HAY, RT .
JOURNAL OF VIROLOGY, 1994, 68 (11) :7292-7300
[30]   Construction of ovine adenovirus recombinants by gene insertion or deletion of related terminal region sequences [J].
Xu, ZZ ;
Hyatt, A ;
Boyle, DB ;
Both, GW .
VIROLOGY, 1997, 230 (01) :62-71