Toward unrestricted use of public genomic data

被引:43
作者
Amann, Rudolf I. [1 ]
Baichoo, Shakuntala [2 ]
Blencowe, Benjamin J. [3 ,4 ]
Bork, Peer [5 ]
Borodovsky, Mark [6 ]
Brooksbank, Cath [7 ]
Chain, Patrick S. G. [8 ]
Colwell, Rita R. [9 ]
Daffonchio, Daniele G. [10 ,11 ]
Danchin, Antoine [12 ,13 ]
de Lorenzo, Victor [14 ]
Dorrestein, Pieter C. [15 ,16 ]
Finn, Robert D. [7 ]
Fraser, Claire M. [17 ]
Gilbert, Jack A. [18 ]
Hallam, Steven J. [19 ,20 ,21 ]
Hugenholtz, Philip [22 ,23 ,24 ]
Ioannidis, John P. A. [25 ,26 ]
Jansson, Janet K. [27 ]
Kim, Jihyun F. [28 ,29 ]
Klenk, Hans-Peter [30 ]
Klotz, Martin G. [31 ,32 ]
Knight, Rob [33 ,34 ,35 ,36 ]
Konstantinidis, Konstantinos T. [37 ,38 ]
Kyrpides, Nikos C. [39 ]
Mason, Christopher E. [40 ,41 ,42 ]
McHardy, Alice C. [43 ]
Meyer, Folker [44 ]
Ouzounis, Christos A. [45 ]
Patrinos, Aristides A. N. [46 ]
Podar, Mircea [47 ]
Pollard, Katherine S. [48 ,49 ]
Ravel, Jacques [17 ]
Munoz, Alejandro Reyes [50 ]
Roberts, Richard J. [51 ]
Rossello-Mora, Ramon [52 ]
Sansone, Susanna-Assunta [53 ]
Schloss, Patrick D. [54 ]
Schriml, Lynn M. [17 ]
Setubal, Jogo C. [55 ]
Sorek, Rotem [56 ]
Stevens, Rick L. [57 ,58 ,59 ]
Tiedje, James M. [60 ,61 ]
Turjanski, Adrian [62 ]
Tyson, Gene W. [22 ]
Ussery, David W. [63 ]
Weinstock, George M. [64 ]
White, Owen [17 ]
Whitman, William B. [65 ]
Xenarios, Ioannis [66 ]
机构
[1] Max Planck Inst Marine Microbiol, D-28359 Bremen, Germany
[2] Univ Mauritius, Dept Comp Sci & Engn, Reduit 80837, Mauritius
[3] Univ Toronto, Donnelly Ctr, 160 Coll St, Toronto, ON M5S 3E1, Canada
[4] Univ Toronto, Dept Mol Genet, 160 Coll St, Toronto, ON M5S 3E1, Canada
[5] European Mol Biol Lab, Struct & Computat Biol, Heidelberg, Germany
[6] Georgia Tech, Wallace H Coulter Dept Biomed Engn, Atlanta, GA 30332 USA
[7] EMBL EBI, Wellcome Genome Campus, Cambridge CB10 1SD, England
[8] Los Alamos Natl Lab, Biosci Div, Los Alamos, NM USA
[9] CosmosID, Rockville, MD USA
[10] KAUST, Biol & Environm Sci & Engn Div BESE, Thuwal 239556900, Saudi Arabia
[11] Univ Milan, Dept Food Environm & Nutr Sci, I-20133 Milan, Italy
[12] Hosp Pitie Salpetriere, Integr Inst Cardiometab & Nutr, 47 Blvd Hosp, F-75013 Paris, France
[13] Univ Hong Kong, Li KaShing Fac Med, Sch Biomed Sci, 21 Sassoon Rd, Hong Kong, Peoples R China
[14] CSIC, Ctr Nacl Biotecnol, E-28049 Madrid, Spain
[15] Univ Calif San Diego, Collaborat Mass Spectrometry Innovat Ctr, La Jolla, CA 92093 USA
[16] Univ Calif San Diego, Skaggs Sch Pharm & Pharmaceut Sci, La Jolla, CA 92093 USA
[17] Univ Maryland, Sch Med, Inst Genome Sci, Baltimore, MD 21201 USA
[18] Univ Chicago, Surg, Microbiome Ctr, Chicago, IL 60637 USA
[19] Univ British Columbia, Dept Microbiol & Immunol, Vancouver, BC V6T 1Z1, Canada
[20] Univ British Columbia, ECOSCOPE Training Program, Vancouver, BC V6T 1Z3, Canada
[21] Univ Queensland, Sch Chem & Mol Biosci, Canada Australian Ctr Ecogen Sch, Brisbane, Qld, Australia
[22] Stanford Univ, Dept Med, Stanford, CA 94305 USA
[23] Stanford Univ, Dept Hlth Res & Policy, Stanford, CA 94305 USA
[24] Stanford Univ, Dept Biomed Data Sci, Stanford, CA 94305 USA
[25] Stanford Univ, Dept Stat, Stanford, CA 94305 USA
[26] Meta Res Innovat Ctr Stanford METRICS, Stanford, CA 94305 USA
[27] Pacific Northwest Natl Lab, Earth & Biol Sci Directorate, Biol Sci Div, Richland, WA USA
[28] Yonsei Univ, Dept Syst Biol, 50 Yonsei Ro, Seoul 03722, South Korea
[29] Yonsei Univ, Div Life Sci, 50 Yonsei Ro, Seoul 03722, South Korea
[30] Newcastle Univ, Fac Sci Agr & Engn, Sch Nat & Environm Sci, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England
[31] Washington State Univ, Coll Vet Med, Sch Mol Biosci, Richland, WA USA
[32] Xiamen Univ, Coll Ocean & Earth Sci, Inst Marine Microbes & Ecospheres, State Key Lab Marine Environm Sci, Xiamen, Peoples R China
[33] Univ Calif San Diego, Ctr Microbiome Innovat, 9500 Gilman Dr, San Diego, CA 92023 USA
[34] Univ Calif San Diego, Dept Pediat, 9500 Gilman Dr, San Diego, CA 92023 USA
[35] Univ Calif San Diego, Dept Bioengn, 9500 Gilman Dr, San Diego, CA 92023 USA
[36] Univ Calif San Diego, Dept Comp Sci & Engn, 9500 Gilman Dr, San Diego, CA 92023 USA
[37] Georgia Inst Technol, Sch Civil & Environm Engn, 311 Ferst Dr NW, Atlanta, GA 30332 USA
[38] Georgia Inst Technol, Sch Biol Sci, 311 Ferst Dr NW, Atlanta, GA 30332 USA
[39] Lawrence Berkeley Natl Lab, Environm Genom & Syst Biol Div, Berkeley, CA 94720 USA
[40] Weill Cornell Med, Dept Physiol & Biophys, New York, NY USA
[41] Weill Cornell Med, HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsau, New York, NY USA
[42] Weill Cornell Med, WorldQuant Initiat Quantitat Predict, New York, NY USA
[43] Helmholtz Ctr Infect Res, Dept Computat Biol Infect Res, D-38124 Braunschweig, Germany
[44] Argonne Natl Lab, Math & Comp Sci Div, 9700 S Cass Ave, Lemont, IL 60439 USA
[45] Ctr Res & Technol Hellas, Chem Proc & Energy Resources Inst, Biol Computat & Proc Lab, GR-57001 Thessaloniki, Greece
[46] UC Santa Barbara, Novim, Kohn Hall, Santa Barbara, CA 93106 USA
[47] Oak Ridge Natl Lab, Biosci Div, Oak Ridge, TN USA
[48] Univ Calif San Francisco, Gladstone Inst, San Francisco, CA 94158 USA
[49] Chan Zuckerberg Biohub, San Francisco, CA 94158 USA
[50] Univ Los Andes, Dept Ciencias Biol, Bogota, Colombia
基金
美国国家科学基金会; 英国生物技术与生命科学研究理事会;
关键词
D O I
10.1126/science.aaw1280
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
[No abstract available]
引用
收藏
页码:350 / +
页数:6
相关论文
共 15 条
[11]   Big Data: Astronomical or Genomical? [J].
Stephens, Zachary D. ;
Lee, Skylar Y. ;
Faghri, Faraz ;
Campbell, Roy H. ;
Zhai, Chengxiang ;
Efron, Miles J. ;
Iyer, Ravishankar ;
Schatz, Michael C. ;
Sinha, Saurabh ;
Robinson, Gene E. .
PLOS BIOLOGY, 2015, 13 (07)
[13]  
Trust W., 2003, M REPORT
[14]   Reproducible research practices, transparency, and open access data in the biomedical literature, 2015-2017 [J].
Wallach, Oshua D. ;
Boyack, Kevin W. ;
Ioannidis, John P. A. .
PLOS BIOLOGY, 2018, 16 (11)
[15]   Comment: The FAIR Guiding Principles for scientific data management and stewardship [J].
Wilkinson, Mark D. ;
Dumontier, Michel ;
Aalbersberg, IJsbrand Jan ;
Appleton, Gabrielle ;
Axton, Myles ;
Baak, Arie ;
Blomberg, Niklas ;
Boiten, Jan-Willem ;
Santos, Luiz Bonino da Silva ;
Bourne, Philip E. ;
Bouwman, Jildau ;
Brookes, Anthony J. ;
Clark, Tim ;
Crosas, Merce ;
Dillo, Ingrid ;
Dumon, Olivier ;
Edmunds, Scott ;
Evelo, Chris T. ;
Finkers, Richard ;
Gonzalez-Beltran, Alejandra ;
Gray, Alasdair J. G. ;
Groth, Paul ;
Goble, Carole ;
Grethe, Jeffrey S. ;
Heringa, Jaap ;
't Hoen, Peter A. C. ;
Hooft, Rob ;
Kuhn, Tobias ;
Kok, Ruben ;
Kok, Joost ;
Lusher, Scott J. ;
Martone, Maryann E. ;
Mons, Albert ;
Packer, Abel L. ;
Persson, Bengt ;
Rocca-Serra, Philippe ;
Roos, Marco ;
van Schaik, Rene ;
Sansone, Susanna-Assunta ;
Schultes, Erik ;
Sengstag, Thierry ;
Slater, Ted ;
Strawn, George ;
Swertz, Morris A. ;
Thompson, Mark ;
van der Lei, Johan ;
van Mulligen, Erik ;
Velterop, Jan ;
Waagmeester, Andra ;
Wittenburg, Peter .
SCIENTIFIC DATA, 2016, 3