Novel leverage of structural genomics

被引：36

作者：

Liu, Jinfeng

Montelione, Gaetano T.

Rost, Burkhard

机构：

[1] Columbia Univ, Dept Biochem & Mol Biophys, New York, NY 10032 USA

[2] Columbia Univ, Ctr Computat Biol & Bioinformat C2B2, New York, NY 10032 USA

[3] Columbia Univ, NE Struct Genom Consortium NESG, New York, NY 10032 USA

[4] Genentech Inc, Dept Bioinformat, San Francisco, CA 94080 USA

[5] Rutgers State Univ, Ctr Adv Biotechnol & Med, Piscataway, NJ 08854 USA

[6] Robert Wood Johnson Med Sch, Dept Biochem, Piscataway, NJ 08854 USA

[7] Rutgers State Univ, Dept Mol Biol & Biochem, NE Struct Genom Consortium NESG, Piscataway, NJ 08854 USA

来源：

NATURE BIOTECHNOLOGY | 2007年 / 25卷 / 08期

关键词：

D O I：

10.1038/nbt0807-849

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 ; 0836 ; 090102 ; 100705 ;

摘要：

引用

页码：850 / 853

页数：4

共 12 条

[1] Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].

Altschul, SF ;

Madden, TL ;

Schaffer, AA ;

Zhang, JH ;

Zhang, Z ;

Miller, W ;

Lipman, DJ .

NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402

[2] The universal protein resource (UniProt) [J].

Bairoch, A ;

Apweiler, R ;

Wu, CH ;

Barker, WC ;

Boeckmann, B ;

Ferro, S ;

Gasteiger, E ;

Huang, HZ ;

Lopez, R ;

Magrane, M ;

Martin, MJ ;

Natale, DA ;

O'Donovan, C ;

Redaschi, N ;

Yeh, LSL .

NUCLEIC ACIDS RESEARCH, 2005, 33 :D154-D159

[3] Protein structure prediction and structural genomics [J].

Baker, D ;

Sali, A .

SCIENCE, 2001, 294 (5540) :93-96

[4] The Protein Data Bank [J].

Berman, HM ;

Westbrook, J ;

Feng, Z ;

Gilliland, G ;

Bhat, TN ;

Weissig, H ;

Shindyalov, IN ;

Bourne, PE .

NUCLEIC ACIDS RESEARCH, 2000, 28 (01) :235-242

[5] The impact of structural genomics: Expectations and outcomes [J].

Chandonia, JM ;

Brenner, SE .

SCIENCE, 2006, 311 (5759) :347-351

[6] Structural genomics in Europe: Slow start, strong finish? [J].

Heinemann, U .

NATURE STRUCTURAL BIOLOGY, 2000, 7 (Suppl 11) :940-942

[7] Initial sequencing and analysis of the human genome [J].

Lander, ES ;

Int Human Genome Sequencing Consortium ;

Linton, LM ;

Birren, B ;

Nusbaum, C ;

Zody, MC ;

Baldwin, J ;

Devon, K ;

Dewar, K ;

Doyle, M ;

FitzHugh, W ;

Funke, R ;

Gage, D ;

Harris, K ;

Heaford, A ;

Howland, J ;

Kann, L ;

Lehoczky, J ;

LeVine, R ;

McEwan, P ;

McKernan, K ;

Meldrim, J ;

Mesirov, JP ;

Miranda, C ;

Morris, W ;

Naylor, J ;

Raymond, C ;

Rosetti, M ;

Santos, R ;

Sheridan, A ;

Sougnez, C ;

Stange-Thomann, N ;

Stojanovic, N ;

Subramanian, A ;

Wyman, D ;

Rogers, J ;

Sulston, J ;

Ainscough, R ;

Beck, S ;

Bentley, D ;

Burton, J ;

Clee, C ;

Carter, N ;

Coulson, A ;

Deadman, R ;

Deloukas, P ;

Dunham, A ;

Dunham, I ;

Durbin, R ;

French, L .

NATURE, 2001, 409 (6822) :860-921

[8] Strategies for high-throughput comparative modeling: Applications to leverage analysis in structural genomics and protein family organization [J].

Mirkovic, Nebojsa ;

Li, Zhaohui ;

Parnassa, Andrew ;

Murray, Diana .

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2007, 66 (04) :766-777

[9] Structural genomics in North America [J].

Terwilliger, TC .

NATURE STRUCTURAL BIOLOGY, 2000, 7 (Suppl 11) :935-939

[10] Environmental genome shotgun sequencing of the Sargasso Sea [J].

Venter, JC ;

Remington, K ;

Heidelberg, JF ;

Halpern, AL ;

Rusch, D ;

Eisen, JA ;

Wu, DY ;

Paulsen, I ;

Nelson, KE ;

Nelson, W ;

Fouts, DE ;

Levy, S ;

Knap, AH ;

Lomas, MW ;

Nealson, K ;

White, O ;

Peterson, J ;

Hoffman, J ;

Parsons, R ;

Baden-Tillson, H ;

Pfannkoch, C ;

Rogers, YH ;

Smith, HO .

SCIENCE, 2004, 304 (5667) :66-74

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