Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana

被引：182

作者：

Theologis, A

Ecker, JR

Palm, CJ

Federspiel, NA

Kaul, S

White, O

Alonso, J

Altafi, H

Araujo, R

Bowman, CL

Brooks, SY

Buehler, E

Chan, A

Chao, QM

Chen, HM

Cheuk, RF

Chin, CW

Chung, MK

Conn, L

Conway, AB

Conway, AR

Creasy, TH

Dewar, K

Dunn, P

Etgu, P

Feldblyum, TV

Feng, JD

Fong, B

Fujii, CY

Gill, JE

Goldsmith, AD

Haas, B

Hansen, NF

Hughes, B

Huizar, L

Hunter, JL

Jenkins, J

Johnson-Hopson, C

Khan, S

Khaykin, E

Kim, CJ

Koo, HL

Kremenetskaia, I

Kurtz, DB

Kwan, A

Lam, B

Langin-Hooper, S

Lee, A

Lee, JM

Lenz, CA

机构：

[1] Univ Calif Berkeley, USDA, Ctr Plant Gene Express, Albany, CA 94710 USA

[2] Univ Penn, Dept Biol, Inst Plant Sci, Philadelphia, PA 19104 USA

[3] Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA

[4] Inst Genom Res, Rockville, MD 20850 USA

来源：

NATURE | 2000年 / 408卷 / 6814期

关键词：

D O I：

10.1038/35048500

中图分类号：

O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

The genome of the flowering plant Arabidopsis thaliana has five chromosomes(1,2). Here we report the sequence of the largest, chromosome 1, in two contigs of around 14.2 and 14.6 megabases. The contigs extend from the telomeres to the centromeric borders, regions rich in transposons, retrotransposons and repetitive elements such as the 180-base-pair repeat. The chromosome represents 25% of the genome and contains about 6,850 open reading frames, 236 transfer RNAs (tRNAs) and 12 small nuclear RNAs. There are two clusters of tRNA genes at different places on the chromosome. One consists of 27 tRNA Pro genes and the other contains 27 tandem repeats of tRNA(Tyr)-tRNA(Tyr)-tRNA(Ser) genes. Chromosome 1 contains about 300 gene families with clustered duplications. There are also many repeat elements, representing 8% of the sequence.

引用

页码：816 / 820

页数：5

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