Theoretical study of tautomeric forms of uracil. 1. Relative order of stabilities and their relation to proton affinities and deprotonation enthalpies

被引:120
作者
Kryachko, ES [1 ]
Nguyen, MT [1 ]
Zeegers-Huyskens, T [1 ]
机构
[1] Univ Louvain, Dept Chem, B-3001 Heverlee, Belgium
关键词
D O I
10.1021/jp001031j
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The potential-energy surface of the uracil tautomerization is comprised of 12 different tautomeric forms, except uracil itself. Their optimized structures are determined at the B3LYP/6-31+G(d,p) computational level. Five structures are reported for the first time, although four of them fall into the relative-energy interval already investigated in the past. The relative order of stability of all uracil structures is established. The proton affinities (PAs) and the deprotonation enthalpies (DPEs) of the atoms or bonds involved in the tautomerization process are calculated at the same computational level. The PAs and DPEs values sensitively depend on the tautomeric form, with the PAs of the oxygen and nitrogen atoms ranging from 815 to 947 kJ mol(-1) and the DPEs of the OH and NH groups from 1295 to 1448 kJ mol(-1). The relative energies of the uracil structures with respect to uracil are then rationalized in terms of a second-order polynomial of the difference between their mean PAs and DPEs.
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页码:1288 / 1295
页数:8
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共 71 条
[41]  
Lowdin P. O., 1965, ADV QUANTUM CHEM, V2, P213, DOI DOI 10.1016/S0065-3276(08)60076-3
[42]   PROTON TUNNELING IN DNA AND ITS BIOLOGICAL IMPLICATIONS [J].
LOWDIN, PO .
REVIEWS OF MODERN PHYSICS, 1963, 35 (03) :724-+
[43]   Cytosine and uracil synthesis by quenching with high-temperature plasma [J].
Miyakawa, S ;
Murasawa, K ;
Kobayashi, K ;
Sawaoka, AB .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (36) :8144-8145
[44]   Excited states dipole moments and polarizabilities of uracil and cytosine 5-halo derivatives [J].
Monshi, M ;
Al-Farhan, K ;
Al-Resayes, S ;
Ghaith, A ;
Hasanein, AA .
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 1997, 53 (14) :2669-2677
[45]  
Nguyen MT, 1998, J CHEM SOC FARADAY T, V94, P1277
[46]  
NORINDER U, 1987, J MOL STRUC-THEOCHEM, V36, P259, DOI 10.1016/0166-1280(87)85062-5
[47]  
NOWAK MJ, 1978, Z NATURFORSCH C, V33, P876
[48]   UV PHOTOELECTRON STUDIES OF BIOLOGICAL PYRIMIDINES - VALENCE ELECTRONIC-STRUCTURE OF METHYL-SUBSTITUTED URACILS [J].
PADVA, A ;
ODONNELL, TJ ;
LEBRETON, PR .
CHEMICAL PHYSICS LETTERS, 1976, 41 (02) :278-282
[49]   UV PHOTOELECTRON STUDIES OF BIOLOGICAL PYRIMIDINES - ELECTRONIC-STRUCTURE OF URACIL [J].
PADVA, A ;
LEBRETON, PR ;
DINERSTEIN, RJ ;
RIDYARD, JNA .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1974, 60 (04) :1262-1268
[50]   SOLVENT EFFECTS IN DENSITY-FUNCTIONAL CALCULATIONS OF URACIL AND CYTOSINE TAUTOMERISM [J].
PAGLIERI, G ;
CORONGIU, G ;
ESTRIN, DA .
INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, 1995, 56 (05) :615-625