The molecular sociology of the cell

被引:410
作者
Robinson, Carol V.
Sali, Andrej
Baumeister, Wolfgang
机构
[1] Univ Cambridge, Dept Chem, Cambridge CB2 1EW, England
[2] Univ Calif San Francisco, Dept Bioengn & Therapeut Sci, Dept Pharmaceut Chem, San Francisco, CA 94158 USA
[3] Calif Inst Quantitat Biosci, San Francisco, CA 94158 USA
[4] Max Planck Inst Biochem, Dept Mol Struct Biol, D-82152 Martinsried, Germany
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
D O I
10.1038/nature06523
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Proteomic studies have yielded detailed lists of the proteins present in a cell. Comparatively little is known, however, about how these proteins interact and are spatially arranged within the 'functional modules' of the cell: that is, the 'molecular sociology' of the cell. This gap is now being bridged by using emerging experimental techniques, such as mass spectrometry of complexes and single- particle cryo- electron microscopy, to complement traditional biochemical and biophysical methods. With the development of integrative computational methods to exploit the data obtained, such hybrid approaches will uncover the molecular architectures, and perhaps even atomic models, of many protein complexes. With these structures in hand, researchers will be poised to use cryo- electron tomography to view protein complexes in action within cells, providing unprecedented insights into protein- interaction networks.
引用
收藏
页码:973 / 982
页数:10
相关论文
共 100 条
[1]   Mass spectrometry-based proteomics [J].
Aebersold, R ;
Mann, M .
NATURE, 2003, 422 (6928) :198-207
[2]   Structural characterization of assemblies from overall shape and subcomplex compositions [J].
Alber, F ;
Kim, MF ;
Sali, A .
STRUCTURE, 2005, 13 (03) :435-445
[3]  
ALBER F, 2004, PRACTICAL BIOINFORMA, P1950
[4]   The molecular architecture of the nuclear pore complex [J].
Alber, Frank ;
Dokudovskaya, Svetlana ;
Veenhoff, Liesbeth M. ;
Zhang, Wenzhu ;
Kipper, Julia ;
Devos, Damien ;
Suprapto, Adisetyantari ;
Karni-Schmidt, Orit ;
Williams, Rosemary ;
Chait, Brian T. ;
Sali, Andrej ;
Rout, Michael P. .
NATURE, 2007, 450 (7170) :695-701
[5]   Determining the architectures of macromolecular assemblies [J].
Alber, Frank ;
Dokudovskaya, Svetlana ;
Veenhoff, Liesbeth M. ;
Zhang, Wenzhu ;
Kipper, Julia ;
Devos, Damien ;
Suprapto, Adisetyantari ;
Karni-Schmidt, Orit ;
Williams, Rosemary ;
Chait, Brian T. ;
Rout, Michael P. ;
Sali, Andrej .
NATURE, 2007, 450 (7170) :683-694
[6]   Structure-based assembly of protein complexes in yeast [J].
Aloy, P ;
Böttcher, B ;
Ceulemans, H ;
Leutwein, C ;
Mellwig, C ;
Fischer, S ;
Gavin, AC ;
Bork, P ;
Superti-Furga, G ;
Serrano, L ;
Russell, RB .
SCIENCE, 2004, 303 (5666) :2026-2029
[7]   Identification of the protein kinase A regulatory RIα-catalytic subunit interface by amide H/2H exchange and protein docking [J].
Anand, GS ;
Law, D ;
Mandell, JG ;
Snead, AN ;
Tsigelny, I ;
Taylor, SS ;
Ten Eyck, LF ;
Komives, EA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (23) :13264-13269
[8]   Chemical cross-linking and mass spectrometry for protein structural modeling [J].
Back, JW ;
de Jong, L ;
Muijsers, AO ;
de Koster, CG .
JOURNAL OF MOLECULAR BIOLOGY, 2003, 331 (02) :303-313
[9]   The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution [J].
Ban, N ;
Nissen, P ;
Hansen, J ;
Moore, PB ;
Steitz, TA .
SCIENCE, 2000, 289 (5481) :905-920
[10]   Affinity purification-mass spectrometry - Powerful tools for the characterization of protein complexes [J].
Bauer, A ;
Kuster, B .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 2003, 270 (04) :570-578