Novel venom peptides from the cone snail Conus pulicarius discovered through next-generation sequencing of its venom duct transcriptome

被引:57
作者
Lluisma, Arturo O. [1 ,2 ]
Milash, Brett A. [3 ]
Moore, Barry [4 ]
Olivera, Baldomero M. [1 ]
Bandyopadhyay, Pradip K. [1 ]
机构
[1] Univ Utah, Dept Biol, Salt Lake City, UT 84112 USA
[2] Univ Philippines, Inst Marine Sci, Quezon City 1101, Philippines
[3] Univ Utah, Bioinformat Core Facil, Salt Lake City, UT 84112 USA
[4] Univ Utah, Eccles Inst Human Genet, Salt Lake City, UT 84112 USA
关键词
Conotoxin; Conopeptide; Toxin; Transcriptome; CONOTOXINS; CHANNEL; IDENTIFICATION; CONOPEPTIDES; LITTERATUS; DIVERSITY; EVOLUTION; ALIGNMENT; BULLATUS; BIOLOGY;
D O I
10.1016/j.margen.2011.09.002
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The venom peptides (i.e., conotoxins or conopeptides) that species in the genus Conus collectively produce are remarkably diverse, estimated to be around 50,000 to 140,000, but the pace of discovery and characterization of these peptides have been rather slow. To date, only a minor fraction have been identified and studied. However, the advent of next-generation DNA sequencing technologies has opened up opportunities for expediting the exploration of this diversity. The whole transcriptome of a venom duct from the vermivorous marine snail C. pulicarius was sequenced using the 454 sequencing platform. Analysis of the data set resulted in the identification of over eighty unique putative conopeptide sequences, the highest number discovered so far from a Conus venom duct transcriptome. More importantly, majority of the sequences were potentially novel, many with unexpected structural features, hinting at the vastness of the diversity of Conus venom peptides that remains to be explored. The sequences represented at least 14 major superfamilies/types (disulfide- and non-disulfide-rich), indicating the structural and functional diversity of conotoxins in the venom of C. pulicarius. In addition, the contryphans were surprisingly more diverse than what is currently known. Comparative analysis of the O-superfamily sequences also revealed insights into the complexity of the processes that drive the evolution and diversification of conotoxins. (C) 2011 Published by Elsevier B.V.
引用
收藏
页码:43 / 51
页数:9
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