Complex networks: The key to systems biology

被引:59
作者
Costa, Luciano da F. [1 ]
Rodrigues, Francisco A. [1 ]
Cristino, Alexandre S. [1 ]
机构
[1] Univ Sao Paulo, Inst Fis, BR-13560970 Sao Carlos, SP, Brazil
基金
巴西圣保罗研究基金会;
关键词
bioinformatics; complex networks; metabolic networks; protein-protein networks; systems biology; transcription networks;
D O I
10.1590/S1415-47572008000400001
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Though introduced recently, complex networks research has grown steadily because of its potential to represent, characterize and model a wide range of intricate natural systems and phenomena. Because of the intrinsic complexity and systemic organization of life, complex networks provide a specially promising framework for systems biology investigation. The current article is an up-to-date review of the major developments related to the application of complex networks in biology, with special attention focused on the more recent literature. The main concepts and models of complex networks are presented and illustrated in an accessible fashion. Three main types of networks are covered: transcriptional regulatory networks, protein-protein interaction networks and metabolic networks. The key role of complex networks for systems biology is extensively illustrated by several of the papers reviewed.
引用
收藏
页码:591 / 601
页数:11
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