Protein-water displacement distributions

被引:167
作者
Doster, W [1 ]
Settles, M
机构
[1] Tech Univ Munich, Dept Phys E13, D-85747 Garching, Germany
[2] Tech Univ Munich, Inst Rontgendiagnost, D-85747 Garching, Germany
来源
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS | 2005年 / 1749卷 / 02期
关键词
protein dynamics; protein-solvent interaction; dynamic neutron scattering; glass transition; myoglobin;
D O I
10.1016/j.bbapap.2005.03.010
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The statistical properties of fast protein-water motions are analyzed by dynamic neutron scattering experiments. Using isotopic exchange, one probes either protein or water hydrogen displacements. A moment analysis of the scattering function in the time domain yields model-independent information such as time-resolved mean square displacements and the Gauss-deviation. From the moments, one can reconstruct the displacement distribution. Hydration water displays two dynamical components, related to librational motions and anomalous diffusion along the protein surface. Rotational transitions of side chains, in particular of methyl groups, persist in the dehydrated and in the solvent-vitrified protein structure. The interaction with water induces further continuous protein motions on a small scale. Water acts as a plasticizer of displacements, which couple to functional processes such as open-closed transitions and ligand exchange. (c) 2005 Elsevier B.V. All rights reserved.
引用
收藏
页码:173 / 186
页数:14
相关论文
共 69 条
[1]   DIFFUSION, VISCOSITY AND STRUCTURAL SLOWING DOWN IN SOFT SPHERE ALLOYS NEAR THE KINETIC GLASS-TRANSITION [J].
BARRAT, JL ;
ROUX, JN ;
HANSEN, JP .
CHEMICAL PHYSICS, 1990, 149 (1-2) :197-208
[2]  
BATZER H, 1981, POLYM BULL, V5, P585
[3]  
BEE M, 1988, QUASIELASTIC NEUTRON, P16
[4]   Slow dynamics of water molecules on the surface of a globular protein [J].
BellissentFunel, MC ;
Zanotti, JM ;
Chen, SH .
FARADAY DISCUSSIONS, 1996, 103 :281-294
[5]   Protein flexibility from the dynamical transition: A force constant analysis [J].
Bicout, DJ ;
Zaccai, G .
BIOPHYSICAL JOURNAL, 2001, 80 (03) :1115-1123
[6]   Harmonic behavior of trehalose-coated carbon-monoxy-myoglobin at high temperature [J].
Cordone, L ;
Ferrand, M ;
Vitrano, E ;
Zaccai, G .
BIOPHYSICAL JOURNAL, 1999, 76 (02) :1043-1047
[7]   Enzyme dynamics and activity:: Time-scale dependence of dynamical transitions in glutamate dehydrogenase solution [J].
Daniel, RM ;
Finney, JL ;
Réat, V ;
Dunn, R ;
Ferrand, M ;
Smith, JC .
BIOPHYSICAL JOURNAL, 1999, 77 (04) :2184-2190
[8]   Enzyme activity below the dynamical transition at 220 K [J].
Daniel, RM ;
Smith, JC ;
Ferrand, M ;
Héry, S ;
Dunn, R ;
Finney, JL .
BIOPHYSICAL JOURNAL, 1998, 75 (05) :2504-2507
[9]  
DEMMEL F, 1999, EUROP BIOPHYS J, V26, P327
[10]   Proton dynamics in supercooled water by molecular dynamics simulations and quasielastic neutron scattering [J].
DiCola, D ;
Deriu, A ;
Sampoli, M ;
Torcini, A .
JOURNAL OF CHEMICAL PHYSICS, 1996, 104 (11) :4223-4232