Crystal and molecular structure, hydrogen bonding and electrostatic interactions of bis(homarine) hydrogen perchlorate studied by X-ray diffraction, DFT calculations, FTIR and Raman spectroscopies

被引:26
作者
Szafran, M. [1 ]
Katrusiak, A. [1 ]
Dega-Szafran, Z. [1 ]
机构
[1] Adam Mickiewicz Univ, Fac Chem, PL-60780 Poznan, Poland
关键词
homarine; X-ray diffraction; B3LYP calculations; FTIR and Raman spectra; hydrogen bond; electrostatic interactions;
D O I
10.1016/j.molstruc.2006.10.049
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The crystals of bis(homarine)hydrogen perchlorate, (HOM)(2)H center dot ClO4, (1) are orthorhombic, space group C2/c, with a pair of HOM molecules bridged by a symmetrical O center dot H center dot O hydrogen bond of 2.480(3) angstrom. In the homoconjugated cation, (HOM center dot H center dot HOM)(+), the H-bonded proton is in centre of inversion. The COO groups are inclined by 29.98(18)degrees to the plane of the pyridine rings, but pyridine rings are coplanar. The ClO4- anion additionally interacts electrostatically with the positively charged nitrogen atoms of the neighbouring HOM molecules. The most stable conformer of (HOM)(2)H center dot ClO4 (2) and four homoconjugated cations, (HOM)(2)H, (3-6) were analysed by the B3LYP/6-31G(d,p) calculations in order to determine the influence of the anion on the hydrogen bonds in the HOM center dot H center dot HOM unit. The FTIR spectrum of the (HOM)(2)H center dot ClO4 shows a broad and intense absorption in the 1500-400 cm(-1) region, typical of short hydrogen bonds. (C) 2006 Elsevier B.V. All rights reserved.
引用
收藏
页码:99 / 106
页数:8
相关论文
共 26 条
[11]  
HEHRE WJ, 1989, INITIO MOL ORBITAL T
[12]  
KOSOWER EM, 1961, J ORG CHEM, V26, P1318
[13]  
NOVAK A, 1974, STRUCT BOND, V18, P257
[14]  
Sheldrick G.M., 1997, SHELXS97 PROGRAM SOL
[15]  
Sheldrick G.M., 1997, Crystal Structure Refinement
[16]  
Speakman J. C., 1972, Struct. Bonding, V12, P141
[17]   AB-INITIO CALCULATION OF VIBRATIONAL ABSORPTION AND CIRCULAR-DICHROISM SPECTRA USING DENSITY-FUNCTIONAL FORCE-FIELDS [J].
STEPHENS, PJ ;
DEVLIN, FJ ;
CHABALOWSKI, CF ;
FRISCH, MJ .
JOURNAL OF PHYSICAL CHEMISTRY, 1994, 98 (45) :11623-11627
[18]   Hydrogen bonds and conformational analysis of bis(1-methylisonicotinate) hydrochloride monohydrate by X-ray diffraction, vibrational spectra and B3LYP calculations [J].
Szafran, M. ;
Katrusiak, A. ;
Dega-Szafran, Z. .
JOURNAL OF MOLECULAR STRUCTURE, 2006, 794 (1-3) :46-53
[19]   Conformational analysis of bis(trigonelline) hydrochloride, perchlorate and their monohydrates by the B3LYP calculations, X-ray diffraction and vibrational spectra [J].
Szafran, M ;
Katrusiak, A ;
Koput, J ;
Dega-Szafran, Z .
JOURNAL OF MOLECULAR STRUCTURE, 2006, 784 (1-3) :98-108
[20]   X-ray, MP2 and DFT studies of the structure and vibrational spectra of homarinium chloride [J].
Szafran, M ;
Koput, J ;
Dega-Szafran, Z ;
Katrusiak, A .
JOURNAL OF MOLECULAR STRUCTURE, 2004, 700 (1-3) :109-125