Identifying functional elements by comparative DNA sequence analysis

被引:24
作者
Tompa, M [1 ]
机构
[1] Univ Washington, Dept Comp Sci & Engn, Seattle, WA 98195 USA
关键词
D O I
10.1101/gr.197101
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
引用
收藏
页码:1143 / 1144
页数:2
相关论文
共 9 条
[1]  
ALTSCHUL SF, 1990, J MOL BIOL, V215, P403, DOI 10.1006/jmbi.1990.9999
[2]   Evolution of light-regulated plant promoters [J].
Argüello-Astorga, G ;
Herrera-Estrella, L .
ANNUAL REVIEW OF PLANT PHYSIOLOGY AND PLANT MOLECULAR BIOLOGY, 1998, 49 :525-555
[3]  
Blanchette M, 2000, Proc Int Conf Intell Syst Mol Biol, V8, P37
[4]  
Blanchette M., 2001, P 5 ANN INT C COMP M, P49
[5]   Surveying Saccharomyces genomes to identify functional elements by comparative DNA sequence analysis [J].
Cliften, PF ;
Hillier, LW ;
Fulton, L ;
Graves, T ;
Miner, T ;
Gish, WR ;
Waterston, RH ;
Johnston, M .
GENOME RESEARCH, 2001, 11 (07) :1175-1186
[6]   Searching for regulatory elements in human noncoding sequences [J].
Duret, L ;
Bucher, P .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 1997, 7 (03) :399-406
[7]   Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation [J].
Roth, FP ;
Hughes, JD ;
Estep, PW ;
Church, GM .
NATURE BIOTECHNOLOGY, 1998, 16 (10) :939-945
[8]   EMBRYONIC EPSILON-GLOBIN AND GAMMA-GLOBIN GENES OF A PROSIMIAN PRIMATE (GALAGO-CRASSICAUDATUS) - NUCLEOTIDE AND AMINO-ACID SEQUENCES, DEVELOPMENTAL REGULATION AND PHYLOGENETIC FOOTPRINTS [J].
TAGLE, DA ;
KOOP, BF ;
GOODMAN, M ;
SLIGHTOM, JL ;
HESS, DL ;
JONES, RT .
JOURNAL OF MOLECULAR BIOLOGY, 1988, 203 (02) :439-455
[9]   CLUSTAL-W - IMPROVING THE SENSITIVITY OF PROGRESSIVE MULTIPLE SEQUENCE ALIGNMENT THROUGH SEQUENCE WEIGHTING, POSITION-SPECIFIC GAP PENALTIES AND WEIGHT MATRIX CHOICE [J].
THOMPSON, JD ;
HIGGINS, DG ;
GIBSON, TJ .
NUCLEIC ACIDS RESEARCH, 1994, 22 (22) :4673-4680