BioCatalogue: a universal catalogue of web services for the life sciences

被引:99
作者
Bhagat, Jiten [1 ]
Tanoh, Franck [1 ]
Nzuobontane, Eric [2 ]
Laurent, Thomas [2 ]
Orlowski, Jerzy [3 ]
Roos, Marco [4 ,5 ]
Wolstencroft, Katy [1 ]
Aleksejevs, Sergejs [1 ]
Stevens, Robert [1 ]
Pettifer, Steve [1 ]
Lopez, Rodrigo [2 ]
Goble, Carole A. [1 ]
机构
[1] Univ Manchester, Sch Comp Sci, Manchester M13 9PL, Lancs, England
[2] EMBL European Bioinformat Inst, Cambridge CB10 1SD, England
[3] Int Inst Mol & Cell Biol Warsaw, Lab Bioinformat & Prot Engn, PL-02109 Warsaw, Poland
[4] Univ Amsterdam, Inst Informat, NL-1098 SJ Amsterdam, Netherlands
[5] Leiden Univ, Med Ctr, Dept Human Genet, NL-2333 ZA Leiden, Netherlands
基金
英国生物技术与生命科学研究理事会;
关键词
BIOINFORMATICS; DATABASE; RESOURCES; ISSUE;
D O I
10.1093/nar/gkq394
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The use of Web Services to enable programmatic access to on-line bioinformatics is becoming increasingly important in the Life Sciences. However, their number, distribution and the variable quality of their documentation can make their discovery and subsequent use difficult. A Web Services registry with information on available services will help to bring together service providers and their users. The BioCatalogue (http://www.biocatalogue.org/) provides a common interface for registering, browsing and annotating Web Services to the Life Science community. Services in the BioCatalogue can be described and searched in multiple ways based upon their technical types, bioinformatics categories, user tags, service providers or data inputs and outputs. They are also subject to constant monitoring, allowing the identification of service problems and changes and the filtering-out of unavailable or unreliable resources. The system is accessible via a human-readable 'Web 2.0'-style interface and a programmatic Web Service interface. The BioCatalogue follows a community approach in which all services can be registered, browsed and incrementally documented with annotations by any member of the scientific community.
引用
收藏
页码:W689 / W694
页数:6
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