Group II Introns: Mobile Ribozymes that Invade DNA

被引:306
作者
Lambowitz, Alan M. [1 ,2 ]
Zimmerly, Steven [3 ]
机构
[1] Univ Texas Austin, Dept Chem & Biochem, Sch Biol Sci, Inst Cellular & Mol Biol, Austin, TX 78712 USA
[2] Univ Texas Austin, Sch Biol Sci, Sect Mol Genet & Microbiol, Austin, TX 78712 USA
[3] Univ Calgary, Dept Biol Sci, Calgary, AB T2N 1N4, Canada
来源
COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY | 2011年 / 3卷 / 08期
基金
美国国家卫生研究院; 加拿大自然科学与工程研究理事会;
关键词
ENCODED REVERSE-TRANSCRIPTASE; DEAD-BOX PROTEIN; SELF-SPLICING INTRON; DOUBLE-STRANDED DNA; STEM-LOOP MOTIF; ACTIVE-SITE; IN-VIVO; TARGET-SITE; PREMESSENGER RNA; BINDING-SITE;
D O I
10.1101/cshperspect.a003616
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Group II introns are mobile ribozymes that self-splice from precursor RNAs to yield excised intron lariat RNAs, which then invade new genomic DNA sites by reverse splicing. The introns encode a reverse transcriptase that stabilizes the catalytically active RNA structure for forward and reverse splicing, and afterwards converts the integrated intron RNA back into DNA. The characteristics of group II introns suggest that they or their close relatives were evolutionary ancestors of spliceosomal introns, the spliceosome, and retrotransposons in eukaryotes. Further, their ribozyme-based DNA integration mechanism enabled the development of group II introns into gene targeting vectors ("targetrons"), which have the unique feature of readily programmable DNA target specificity.
引用
收藏
页码:1 / 19
页数:19
相关论文
共 158 条
[71]   The age and evolution of non-LTR retrotransposable elements [J].
Malik, HS ;
Burke, WD ;
Eickbush, TH .
MOLECULAR BIOLOGY AND EVOLUTION, 1999, 16 (06) :793-805
[72]   Introns and the origin of nucleus-cytosol compartmentalization [J].
Martin, W ;
Koonin, EV .
NATURE, 2006, 440 (7080) :41-45
[73]   RecA-independent ectopic transposition in vivo of a bacterial group II intron [J].
Martínez-Abarca, F ;
Toro, N .
NUCLEIC ACIDS RESEARCH, 2000, 28 (21) :4397-4402
[74]   The RmInt1 group II intron has two different retrohoming pathways for mobility using predominantly the nascent lagging strand at DNA replication forks for priming [J].
Martínez-Abarca, F ;
Barrientos-Durán, A ;
Fernández-López, M ;
Toro, N .
NUCLEIC ACIDS RESEARCH, 2004, 32 (09) :2880-2888
[75]   Group II Intron-Based Gene Targeting Reactions in Eukaryotes [J].
Mastroianni, Marta ;
Watanabe, Kazuo ;
White, Travis B. ;
Zhuang, Fanglei ;
Vernon, Jamie ;
Matsuura, Manabu ;
Wallingford, John ;
Lambowitz, Alan M. .
PLOS ONE, 2008, 3 (09)
[76]   A bacterial group II intron encoding reverse transcriptase, maturase, DNA endonuclease activities: biochemical demonstration of maturase activity and insertion of new genetic information within the intron [J].
Matsuura, M ;
Saldanha, R ;
Ma, HW ;
Wank, H ;
Yang, J ;
Mohr, G ;
Cavanagh, S ;
Dunny, GM ;
Belfort, M ;
Lambowitz, AM .
GENES & DEVELOPMENT, 1997, 11 (21) :2910-2924
[77]   Mechanism of maturase-promoted group II intron splicing [J].
Matsuura, M ;
Noah, JW ;
Lambowitz, AM .
EMBO JOURNAL, 2001, 20 (24) :7259-7270
[78]   STEREOCHEMISTRY OF RNA CLEAVAGE BY THE TETRAHYMENA RIBOZYME AND EVIDENCE THAT THE CHEMICAL STEP IS NOT RATE-LIMITING [J].
MCSWIGGEN, JA ;
CECH, TR .
SCIENCE, 1989, 244 (4905) :679-683
[79]   An intron-encoded protein assists RNA splicing of multiple similar introns of different bacterial genes [J].
Meng, Q ;
Wang, YF ;
Liu, XQ .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (42) :35085-35088
[80]   A novel multifunctional factor involved in trans-splicing of chloroplast introns in Chlamydomonas [J].
Merendino, L ;
Perron, K ;
Rahire, M ;
Howald, I ;
Rochaix, JD ;
Goldschmidt-Clermont, M .
NUCLEIC ACIDS RESEARCH, 2006, 34 (01) :262-274