PDZBase: a protein-protein interaction database for PDZ-domains

被引：157

作者：

Beuming, T

Skrabanek, L

Niv, MY

Mukherjee, P

Weinstein, H

机构：

[1] Cornell Univ, Weill Med Coll, Dept Physiol & Biophys, New York, NY 10021 USA

[2] Cornell Univ, Weill Med Coll, Inst Computat Biomed, New York, NY 10021 USA

来源：

BIOINFORMATICS | 2005年 / 21卷 / 06期

关键词：

D O I：

10.1093/bioinformatics/bti098

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

PDZBase is a database that aims to contain all known PDZ-domain-mediated protein-protein interactions. Currently, PDZBase contains approximately 300 such interactions, which have been manually extracted from > 200 articles. The database can be queried through both sequence motif and keyword-based searches, and the sequences of interacting proteins can be visually inspected through alignments (for the comparison of several interactions), or as residue-based diagrams including schematic secondary structure information (for individual complexes).

引用

页码：827 / 828

页数：2

共 9 条

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