MegaPlex PCR: a strategy for multiplex amplification

被引:33
作者
Meuzelaar, Linda Stroemqvist
Lancaster, Owen
Pasche, J. Paul
Kopal, Guido
Brookes, Anthony J.
机构
[1] Univ Leicester, Dept Genet, Leicester LE1 7RH, Leics, England
[2] Roche Appl Sci, D-82372 Penzberg, Germany
关键词
D O I
10.1038/NMETH1091
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
'MegaPlex PCR' is a robust technology for highly multiplexed amplification of specific DNA sequences. It uses target-specific pairs of PCR primers that are physically separated by surface immobilization. Initial surface-based amplification cycles are then coupled to efficient solution-phase PCR using one common primer pair. We demonstrate this method by co-amplifying and genotyping 75 unselected human single-nucleotide polymorphism ( SNP) loci.
引用
收藏
页码:835 / 837
页数:3
相关论文
共 15 条
[1]   Solid phase DNA amplification: characterisation of primer attachment and amplification mechanisms [J].
Adessi, Celine ;
Matton, Gilles ;
Ayala, Guidon ;
Turcatti, Gerardo ;
Mermod, Jean-Jacques ;
Mayer, Pascal ;
Kawashima, Eric .
NUCLEIC ACIDS RESEARCH, 2000, 28 (20) :87
[2]   Validation of a novel, fully integrated and flexible microarray benchtop facility for gene expression profiling -: art. no. e151 [J].
Baum, M ;
Bielau, S ;
Rittner, N ;
Schmid, K ;
Eggelbusch, K ;
Dahms, M ;
Schlauersbach, A ;
Tahedl, H ;
Beier, M ;
Güimil, R ;
Scheffler, M ;
Hermann, C ;
Funk, JM ;
Wixmerten, A ;
Rebscher, H ;
Hönig, M ;
Andreae, C ;
Büchner, D ;
Moschel, E ;
Glathe, A ;
Jäger, E ;
Thom, M ;
Greil, A ;
Bestvater, F ;
Obermeier, F ;
Burgmaier, J ;
Thome, K ;
Weichert, S ;
Hein, S ;
Binnewies, T ;
Foitzik, V ;
Müller, M ;
Stähler, CF ;
Stähler, PF .
NUCLEIC ACIDS RESEARCH, 2003, 31 (23) :e151
[3]   The elimination of primer-dimer accumulation in PCR [J].
Brownie, J ;
Shawcross, S ;
Theaker, J ;
Whitcombe, D ;
Ferrie, R ;
Newton, C ;
Little, S .
NUCLEIC ACIDS RESEARCH, 1997, 25 (16) :3235-3241
[4]   The genome of the social amoeba Dictyostelium discoideum [J].
Eichinger, L ;
Pachebat, JA ;
Glöckner, G ;
Rajandream, MA ;
Sucgang, R ;
Berriman, M ;
Song, J ;
Olsen, R ;
Szafranski, K ;
Xu, Q ;
Tunggal, B ;
Kummerfeld, S ;
Madera, M ;
Konfortov, BA ;
Rivero, F ;
Bankier, AT ;
Lehmann, R ;
Hamlin, N ;
Davies, R ;
Gaudet, P ;
Fey, P ;
Pilcher, K ;
Chen, G ;
Saunders, D ;
Sodergren, E ;
Davis, P ;
Kerhornou, A ;
Nie, X ;
Hall, N ;
Anjard, C ;
Hemphill, L ;
Bason, N ;
Farbrother, P ;
Desany, B ;
Just, E ;
Morio, T ;
Rost, R ;
Churcher, C ;
Cooper, J ;
Haydock, S ;
van Driessche, N ;
Cronin, A ;
Goodhead, I ;
Muzny, D ;
Mourier, T ;
Pain, A ;
Lu, M ;
Harper, D ;
Lindsay, R ;
Hauser, H .
NATURE, 2005, 435 (7038) :43-57
[5]   Multiplex amplification of all coding sequences within 10 cancer genes by Gene-Collector [J].
Fredriksson, Simon ;
Baner, Johan ;
Dahl, Fredrik ;
Chu, Angela ;
Ji, Hanlee ;
Welch, Katrina ;
Davis, Ronald W. .
NUCLEIC ACIDS RESEARCH, 2007, 35 (07)
[6]   Sensitive and specific method for detecting G protein-coupled receptor mRNAs [J].
Hansen, Arne ;
Chen, Yidong ;
Inman, Jason M. ;
Phan, Quang N. ;
Qi, Zhi-Qing ;
Xiang, Charlie C. ;
Palkovits, Miklos ;
Cherman, Natasha ;
Kuznetsov, Sergei A. ;
Robey, Pamela G. ;
Mezey, Eva ;
Brownstein, Michael J. .
NATURE METHODS, 2007, 4 (01) :35-37
[7]  
Howell WM, 1999, NAT BIOTECHNOL, V17, P87, DOI 10.1038/5270
[8]   Genome sequencing in microfabricated high-density picolitre reactors [J].
Margulies, M ;
Egholm, M ;
Altman, WE ;
Attiya, S ;
Bader, JS ;
Bemben, LA ;
Berka, J ;
Braverman, MS ;
Chen, YJ ;
Chen, ZT ;
Dewell, SB ;
Du, L ;
Fierro, JM ;
Gomes, XV ;
Godwin, BC ;
He, W ;
Helgesen, S ;
Ho, CH ;
Irzyk, GP ;
Jando, SC ;
Alenquer, MLI ;
Jarvie, TP ;
Jirage, KB ;
Kim, JB ;
Knight, JR ;
Lanza, JR ;
Leamon, JH ;
Lefkowitz, SM ;
Lei, M ;
Li, J ;
Lohman, KL ;
Lu, H ;
Makhijani, VB ;
McDade, KE ;
McKenna, MP ;
Myers, EW ;
Nickerson, E ;
Nobile, JR ;
Plant, R ;
Puc, BP ;
Ronan, MT ;
Roth, GT ;
Sarkis, GJ ;
Simons, JF ;
Simpson, JW ;
Srinivasan, M ;
Tartaro, KR ;
Tomasz, A ;
Vogt, KA ;
Volkmer, GA .
NATURE, 2005, 437 (7057) :376-380
[9]   Multiplex polymerase chain reaction: A practical approach [J].
Markoulatos, P ;
Siafakas, N ;
Moncany, M .
JOURNAL OF CLINICAL LABORATORY ANALYSIS, 2002, 16 (01) :47-51
[10]   DNA analysis with multiplex microarray-enhanced PCR [J].
Pemov, A ;
Modi, H ;
Chandler, DP ;
Bavykin, S .
NUCLEIC ACIDS RESEARCH, 2005, 33 (02) :e11