Different types of interactions involving cysteine sulfhydryl group in proteins

被引:84
作者
Pal, D [1 ]
Chakrabarti, P [1 ]
机构
[1] Bose Inst, Dept Biochem, CIT Scheme VIIM, Kolkata 700054, W Bengal, India
关键词
D O I
10.1080/07391102.1998.10509001
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Various types of interactions involving the sulfhydryl group of free cysteine residues have been analyzed using known protein structures. In a hydrogen bond the -SH group is more amenable to donating its proton to a carbonyl group, rather than acting as a proton acceptor. It rarely interacts with a carboxylate group, and is a poor ligand to bind an anionic substrate. It is quite prone to make contacts that are definitely non-hydrogen bond type. In the S...C=O interaction the S atom is placed on the face of an amide group (mostly from the main-chain, but there are cases from the side-chain also) close to the C atom. Cases of S...N interaction, where the S atom is on top of the N atom of another residue (both main-, as well as sidechains, including the guanidinium group) are also observed. A considerable number of Cys residues have aromatic residues as neighbors, and here too, the preferred mode of interaction is along the face. The intra-residue S...C=O interaction constrains the main-chain and side-chain torsion angles (psi and chi(1)), whereas the inter-residue interactions are non-local and stabilize the tertiary structure. The S...C=O interaction may have a role in lowering the pK(a), values of the Cys residues in enzyme active sites.
引用
收藏
页码:1059 / 1072
页数:14
相关论文
共 40 条
[31]   CHARACTERIZATION OF A MUTATED RUBREDOXIN WITH A CYSTEINE LIGAND OF THE IRON REPLACED BY SERINE [J].
MEYER, J ;
GAILLARD, J ;
LUTZ, M .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1995, 212 (03) :827-833
[32]  
MORGAN RS, 1978, INT J PEPT PROT RES, V11, P209
[33]  
MORGAN RS, 1980, INT J PEPT PROT RES, V15, P177
[34]   SULFUR-AROMATIC INTERACTIONS IN PROTEINS [J].
REID, KSC ;
LINDLEY, PF ;
THORNTON, JM .
FEBS LETTERS, 1985, 190 (02) :209-213
[35]   AMINO-ACID PREFERENCES FOR SPECIFIC LOCATIONS AT THE ENDS OF ALPHA-HELICES [J].
RICHARDSON, JS ;
RICHARDSON, DC .
SCIENCE, 1988, 240 (4859) :1648-1652
[36]   SITE-DIRECTED MUTAGENESIS AZOTOBACTER-VINELANDII FERREDOXIN-I - CYSTEINE LIGATION OF THE [4FE-4S] CLUSTER WITH PROTEIN REARRANGEMENT IS PREFERRED OVER SERINE LIGATION [J].
SHEN, B ;
JOLLIE, DR ;
DILLER, TC ;
STOUT, CD ;
STEPHENS, PJ ;
BURGESS, BK .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (22) :10064-10068
[37]   HYDROGEN-BONDING IN GLOBULAR-PROTEINS [J].
STICKLE, DF ;
PRESTA, LG ;
DILL, KA ;
ROSE, GD .
JOURNAL OF MOLECULAR BIOLOGY, 1992, 226 (04) :1143-1159
[38]   CRYSTAL-STRUCTURE OF AN ACTINIDIN E-64 COMPLEX [J].
VARUGHESE, KI ;
SU, Y ;
CROMWELL, D ;
HASNAIN, S ;
XUONG, NH .
BIOCHEMISTRY, 1992, 31 (22) :5172-5176
[39]   DIRECTIONAL PREFERENCE FOR A CATALYTICALLY IMPORTANT N...S CONTACT SEEN IN ACYL-THIOLPROTEASES [J].
VARUGHESE, KI ;
STORER, AC ;
CAREY, PR .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1984, 106 (26) :8252-8257
[40]   CRYSTAL-STRUCTURE OF PAPAIN SUCCINYL-GLN-VAL-VAL-ALA-ALA-P-NITROANILIDE COMPLEX AT 1.7-ANGSTROM RESOLUTION - NONCOVALENT BINDING MODE OF A COMMON SEQUENCE OF ENDOGENOUS THIOL PROTEASE INHIBITORS [J].
YAMAMOTO, A ;
TOMOO, K ;
DOI, M ;
OHISHI, H ;
INOUE, M ;
ISHIDA, T ;
YAMAMOTO, D ;
TSUBOI, S ;
OKAMOTO, H ;
OKADA, Y .
BIOCHEMISTRY, 1992, 31 (46) :11305-11309