Linear oligopeptides .360. Peptide helices as rigid molecular rulers: A conformational study of isotactic homopeptides from alpha-methyl-alpha-isopropylglycine, [L-(alpha Me)Val](n)

被引:93
作者
Polese, A
Formaggio, F
Crisma, M
Valle, G
Toniolo, C
Bonora, GM
Broxterman, QB
Kamphuis, J
机构
[1] UNIV CAGLIARI,PHARMCAO CHEM TECHNOL DEPT,I-09124 CAGLIARI,ITALY
[2] DSM RES BV,BIOORGAN CHEM SECT,NL-6160 MD GELEEN,NETHERLANDS
关键词
amino acids; conformation; helices; molecular rulers; oligopeptides; structure elucidation;
D O I
10.1002/chem.19960020911
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Terminally blocked, isotactic homopeptides from the sterically demanding alpha-methylvaline of general formula Y-[L-(alpha Me)Val](n)-OtBu (Y = Z, pBr-Bz, Ac; n = 2-8) have been prepared step-by-step in solution and fully characterized. The conformations preferred in solution (beta-turn and right-handed 3(10)-helix) have been assessed by FT-IR, H-1 NMR and CD spectroscopy. The molecular and crystal structures of the Z-protected trimer, hexamer, heptamer and octamer have been determined by X-ray diffraction. In the crystal state, while the trimer is folded in a type III beta-turn conformation, the longest homopeptides form well-developed, regular, right-handed 3(10)-helices. The screw sense in the helix of the pBrBz-blocked octamer has been confirmed to he right-handed by solid-state and solution CD spectroscopy. The possible exploitation of these peptide helices as rigid and precise molecular rulers is discussed.
引用
收藏
页码:1104 / 1111
页数:8
相关论文
共 66 条
[1]   PEPTIDE-CHAIN STRUCTURE PARAMETERS, BOND ANGLES AND CONFORMATIONAL ANGLES FROM THE CAMBRIDGE STRUCTURAL DATABASE [J].
ASHIDA, T ;
TSUNOGAE, Y ;
TANAKA, I ;
YAMANE, T .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1987, 43 :212-218
[2]   HELICAL STABILITY OF DE-NOVO DESIGNED ALPHA-AMINOISOBUTYRIC ACID-RICH PEPTIDES AT HIGH-TEMPERATURES [J].
AUGSPURGER, JD ;
BINDRA, VA ;
SCHERAGA, HA ;
KUKI, A .
BIOCHEMISTRY, 1995, 34 (08) :2566-2576
[3]   LONG POLYPEPTIDE 3(10)-HELICES AT ATOMIC RESOLUTION [J].
BAVOSO, A ;
BENEDETTI, E ;
DIBLASIO, B ;
PAVONE, V ;
PEDONE, C ;
TONIOLO, C ;
BONORA, GM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1986, 83 (07) :1988-1992
[4]  
BENEDETTI E, 1983, INT J PEPT PROT RES, V22, P1
[5]   SOLID-STATE GEOMETRY AND CONFORMATION OF LINEAR, DIASTEREOISOMERIC OLIGOPROLINES [J].
BENEDETTI, E ;
BAVOSO, A ;
DIBLASIO, B ;
PAVONE, V ;
PEDONE, C ;
TONIOLO, C ;
BONORA, GM .
BIOPOLYMERS, 1983, 22 (01) :305-317
[6]  
Benedetti E, 1982, CHEM BIOCH AMINO ACI, V6, P105
[7]   CONFORMATIONAL-ANALYSIS OF LINEAR PEPTIDES .5. SPECTROSCOPIC CHARACTERIZATION OF BETA-TURNS IN AIB-CONTAINING OLIGOPEPTIDES IN CHLOROFORM [J].
BONORA, GM ;
MAPELLI, C ;
TONIOLO, C ;
WILKENING, RR ;
STEVENS, ES .
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 1984, 6 (04) :179-188
[8]   NMR-STUDIES OF AN OLIGOPROLINE-CONTAINING PEPTIDE ANALOG THAT BINDS SPECIFICALLY TO THE H-2KD HISTOCOMPATIBILITY MOLECULE [J].
BOULAT, B ;
EMSLEY, L ;
MULLER, N ;
CORRADIN, G ;
MARYANSKI, JL ;
BODENHAUSEN, G .
BIOCHEMISTRY, 1991, 30 (39) :9429-9434
[9]   TERT-BUTYLOXYCARBONYL AND BENZYLOXYCARBONYL AMINO-ACID FLUORIDES - NEW, STABLE RAPID-ACTING ACYLATING AGENTS FOR PEPTIDE-SYNTHESIS [J].
CARPINO, LA ;
MANSOUR, EME ;
SADATAALAEE, D .
JOURNAL OF ORGANIC CHEMISTRY, 1991, 56 (08) :2611-2614
[10]   1-HYDROXY-7-AZABENZOTRIAZOLE - AN EFFICIENT PEPTIDE COUPLING ADDITIVE [J].
CARPINO, LA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1993, 115 (10) :4397-4398