Linear oligopeptides .360. Peptide helices as rigid molecular rulers: A conformational study of isotactic homopeptides from alpha-methyl-alpha-isopropylglycine, [L-(alpha Me)Val](n)

被引:93
作者
Polese, A
Formaggio, F
Crisma, M
Valle, G
Toniolo, C
Bonora, GM
Broxterman, QB
Kamphuis, J
机构
[1] UNIV CAGLIARI,PHARMCAO CHEM TECHNOL DEPT,I-09124 CAGLIARI,ITALY
[2] DSM RES BV,BIOORGAN CHEM SECT,NL-6160 MD GELEEN,NETHERLANDS
关键词
amino acids; conformation; helices; molecular rulers; oligopeptides; structure elucidation;
D O I
10.1002/chem.19960020911
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Terminally blocked, isotactic homopeptides from the sterically demanding alpha-methylvaline of general formula Y-[L-(alpha Me)Val](n)-OtBu (Y = Z, pBr-Bz, Ac; n = 2-8) have been prepared step-by-step in solution and fully characterized. The conformations preferred in solution (beta-turn and right-handed 3(10)-helix) have been assessed by FT-IR, H-1 NMR and CD spectroscopy. The molecular and crystal structures of the Z-protected trimer, hexamer, heptamer and octamer have been determined by X-ray diffraction. In the crystal state, while the trimer is folded in a type III beta-turn conformation, the longest homopeptides form well-developed, regular, right-handed 3(10)-helices. The screw sense in the helix of the pBrBz-blocked octamer has been confirmed to he right-handed by solid-state and solution CD spectroscopy. The possible exploitation of these peptide helices as rigid and precise molecular rulers is discussed.
引用
收藏
页码:1104 / 1111
页数:8
相关论文
共 66 条
[61]   SYNTHESIS OF LONG, HYDROPHILIC, PROTEIN-CROSS-LINKING REAGENTS [J].
WETZ, K ;
FASOLD, H ;
MEYER, C .
ANALYTICAL BIOCHEMISTRY, 1974, 58 (02) :347-360
[62]   CONFORMATIONAL-ANALYSIS OF TRIPEPTIDE MODELS - THE INFLUENCE OF ALPHA,ALPHA-DISUBSTITUTED ALPHA-AMINO-ACIDS ON THE SECONDARY STRUCTURE .1. NMR AND CD INVESTIGATIONS [J].
WIPF, P ;
HEIMGARTNER, H .
HELVETICA CHIMICA ACTA, 1988, 71 (01) :258-267
[63]   CONFORMATIONAL-ANALYSIS OF TRIPEPTIDE MODELS - THE INFLUENCE OF ALPHA,ALPHA-DISUBSTITUTED ALPHA-AMINO-ACIDS ON THE SECONDARY STRUCTURE .2. X-RAY-ANALYSIS AND CONFORMATIONAL ENERGY CALCULATIONS [J].
WIPF, P ;
KUNZ, RW ;
PREWO, R ;
HEIMGARTNER, H .
HELVETICA CHIMICA ACTA, 1988, 71 (01) :268-273
[64]   MOLECULAR RULERS FOR MEASURING RNA STRUCTURE .5. MOLECULAR RULERS WITH 5 OR 11 PROLINES INTRAMOLECULARLY CROSSLINK TO G45 OF YEAST PHENYLALANINE TRANSFER-RNA [J].
YAGER, TD ;
REUBEN, MA ;
AINPOUR, PR ;
WICKSTROM, E .
FEBS LETTERS, 1981, 133 (01) :59-62
[65]   PROLINE-DEPENDENT STRUCTURAL AND BIOLOGICAL PROPERTIES OF PEPTIDES AND PROTEINS [J].
YARON, A ;
NAIDER, F .
CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY, 1993, 28 (01) :31-81
[66]  
1970, BIOCHEMISTRY-US, V9, P3471