A study on the intermolecular hydrogen bonds of α-glycylglycine in its actual crystalline phase using ab initio calculated 14N and 2H nuclear quadrupole coupling constants

被引:31
作者
Elmi, F
Hadipour, NL
机构
[1] Tarbiat Modares Univ, Dept Chem, Tehran, Iran
[2] Natl Synchrotron Radiat Res Ctr, Xray Struct Biol Grp, Hsinchu 30077, Taiwan
关键词
D O I
10.1021/jp046216v
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
alpha-Glycylglycine in its actual crystalline phase is studied by ab initio calculated nuclear quadrupole coupling constants. These physical quantities are computed for H-2 and N-14 in the hydrogen bonds. The type of hydrogen bond is the N-(HO)-O-... type. The computations are performed with the RHF and B3LYP methods and 6-31++G** and 6-311++G** basis sets using the Gaussian 98 program. Values of the calculated nuclear quadrupole coupling constants are shown in Tables 1-3. The aim of this work is the study of 2H and 14N quadrupole coupling constants which contribute in the (CONHO)-H-2-O-...=(CNH)-H-2 type of hydrogen bond. The computed nuclear quadrupole coupling constants of H-2 nuclei meet the related experimental values. In addition, the computed chi value of N-14 belonging to the -CO-(NH)-N-14- group agrees well with values obtained experimentally. However, there are some discrepancies between calculated N-14 chi values of the N+H3 residue and experiments. Also, the values of these physical parameters are calculated for >(CH2)-H-2 of alpha-glycylglycine in its crystalline phase. Calculations for these parameters are carried out in a single molecule using X-ray diffraction coordinates, too.
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页码:1729 / 1733
页数:5
相关论文
共 49 条
[21]   Hydrogen bonding and distance studies of amino acids and peptides using solid state 2D H-1-C-13 heteronuclear correlation spectra [J].
Gu, ZT ;
Ridenour, CF ;
Bronnimann, CE ;
Iwashita, T ;
McDermott, A .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1996, 118 (04) :822-829
[22]  
HADIPOUR NL, 1986, J MAGN RESON, V67, P466
[23]   Amide I modes in the N-methylacetamide dimer and glycine dipeptide analog:: Diagonal force constants [J].
Ham, S ;
Cho, M .
JOURNAL OF CHEMICAL PHYSICS, 2003, 118 (15) :6915-6922
[24]   Proton NMR Chemical Shift Behavior of Hydrogen-Bonded Amide Proton of Glycine-Containing Peptides and Polypeptides as Studied by ab initio MO Calculation [J].
Hori, S. ;
Yamauchi, K. ;
Kuroki, S. ;
Ando, I. .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2002, 3 (08) :907-913
[25]   DEUTERIUM AND NITROGEN PURE QUADRUPOLE-RESONANCE IN AMINO-ACIDS .2. [J].
HUNT, MJ ;
MACKAY, AL .
JOURNAL OF MAGNETIC RESONANCE, 1976, 22 (02) :295-301
[26]   DEUTERIUM AND NITROGEN PURE QUADRUPOLE-RESONANCE IN DEUTERATED AMINO-ACIDS [J].
HUNT, MJ ;
MACKAY, AL .
JOURNAL OF MAGNETIC RESONANCE, 1974, 15 (03) :402-414
[27]   The conformational behavior of polyglycine as predicted by a density functional model with periodic boundary conditions [J].
Improta, R ;
Barone, V ;
Kudin, KN ;
Scuseria, GE .
JOURNAL OF CHEMICAL PHYSICS, 2001, 114 (06) :2541-2549
[28]   Structure and conformational behavior of biopolymers by density functional calculations employing periodic boundary conditions.: I.: The case of polyglycine, polyalanine, and poly-α-aminoisobutyric acid in vacuo [J].
Improta, R ;
Barone, V ;
Kudin, KN ;
Scuseria, GE .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2001, 123 (14) :3311-3322
[29]  
KOCH W, 2000, CHEM GUIDE DENSITY F, pCH12
[30]   SELF-CONSISTENT MOLECULAR-ORBITAL METHODS .20. BASIS SET FOR CORRELATED WAVE-FUNCTIONS [J].
KRISHNAN, R ;
BINKLEY, JS ;
SEEGER, R ;
POPLE, JA .
JOURNAL OF CHEMICAL PHYSICS, 1980, 72 (01) :650-654